Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0271 ATGCAAGTCCTTCAAACCTCTTATCTCTTTACTTTCCCTAAACCTTTAAACCCTTCCTCTCCGCATTCCCACCTTCACCCTCGTCTTTCGCCACTTCTCTTCCGCCGCCACCACCACTCTCTCTCCGTCGTCGCCAAGGCCTTCAGCTCCGACGAGTTCCCCGTCGACGACACCTTCCTCGACACATTCGGCCCCAAAGACAAGGAAACCGAAGACGAAGCTCGAAGACGCAACTGGATTGAGCGAGGCTGGGCTCCATGGGAAGAAATCCTCACACCGGAGGCCGATTTCGCACGCAAGAGCCTCAACGAAGGCGAAGAGGTTGCTCTGCGTTCTCCCGAAGCCATCGAAGCGTTCAAGATGCTAAACCCTAAGTACCGAAAGAAGAAGATGGAGGAAATGGGATTGACGGAGGAAGATTACTACGCGAAGCAGTTCGAGATCAAGGGAGAGATTCCGGAGCCGCTGGTGACGAAGTGGTCGGGGCCACTAGTGGTTCGCCTCGTGCCGCCGCGCGATTGGCCGCCTCGAGGTTGGGAGGTTGATCGGAAGGAATTGGCGTTCATTCGTGAGGCGCATAAGATGCAGGCGAGGAGAGTGAGCTTGGAAGAGGTTGCGAATGATGTGAGAACTGAAACTGACGATGTGTGCGTGGATAGGTACAAGGTGTTTCTCAAGCAGTATAAGGAGTGGGTGGAGGCTAATAAGGATAGATTGGAAGAGGAGTCTTATAAGCAAGACCAAGATTATTACCCTGGTAGAAGGAAAAGAGGCAAGGATTATAAGGAGGGAATGTATGAGCTTCCGTTTTATTATCCTGGGCAAATTTGTCTAGGGAAGGTGACAATGCTGCATCTCTATCAAGGGGCATTTGTTGACATTGGTGGTGTACACGATGGGTGGGTTCCTATAAAGAATAATGATTGGTATTGGATTCGCCATCACATAAAAGTGGGTATGCACGTCATTGTTGAAATTACGGTTAGTATTTCATACTGCTTTTTTTTCTTCATTTTTGTTAGTTTCCATGATTCCTGTGTTTATTCAATAAATGGATTTCTTTTACCATTCTGTTCACTTATTTACATTTTTATTTCACAGGCAAAGCGAGATCCTTATCGCTTCCGTTTTCCTATCGAACTTCGTTTTGTTGATCCAAATATAGATCATCTAATATTTAACAGATTTGACTCCCCACCAATATTTCATCGTGATGAAGATACTAACGAAGATGAATTACGGCGTGACTGTGGAAGACCTCCTGTTCCTAGAAAAGATCCAGGAGACAAGCCACAGGAAGAATCTCTATTGTCTAACCATCCATACGTTGAAAAGTTGTGGCAAATTAATGTAGCTGAGCAAATGATTTTGGATGATATGGTGATTAATCCTGATAAATACAAAGGCAAAAAGATGTCAGAGTTGGATGATGAAGAGGATTTTAATGAAGAAAATGCTGTTCAGTATACAAAAGCTTATTATAAGAATACATTACTACCAAAAACTATTCTGAAAACAAGTGTCAAAGAGCTTGACTTAGAGGCAGCACTTGCAGAGCGTGAACTCCATACTAAATTAAGGAAGCAAGCAAATGAAAGAGGTGAGAAATACAAAATTACCAAGTTGAGGCGCAATGATGAGATGGATGACTATGACTACATGCATTGGCGTAGATCATTTGAGGAAAGAGAAGCATTGCTTAGAGATATCAGCTGTCGCAAAGCTCTTGATCTACCATTGGAAGAGCCAGGAAGGTATGTTGATGCTAGTTATTTTGGTAATGACCAATATGATCCTACAAGTCCTCTGTATCGTTATGACTACTGGGGGGAACCCAAGAATTCCGAGAAGAGCATGCAAGACCGGATGGCAGATATCCATAACAAAAGAATTGTGGGCAAGGGCACTGTTTGGTATGAAATGTCGTACGAAGATTGCATCAAGCAACAGATGGAAAGAGAAGCCCTGTCGAAGGGACAGCAGGACCAAGAAGTTTACAATGAAGATACAAAGCATTCTGAAGATGAGGATGAGGATGAGGATGAAGATGACGATGACTTTGACTTCAGCATTCTGAGCAGTCTTGGTAATAATTTCTCAGATCAGCCTCGTGTTAATGGGACTGAGTCTTCTGGAATATCAGGGGAGGGCATGTTTCAGGATTGA 2166 0.4418 MQVLQTSYLFTFPKPLNPSSPHSHLHPRLSPLLFRRHHHSLSVVAKAFSSDEFPVDDTFLDTFGPKDKETEDEARRRNWIERGWAPWEEILTPEADFARKSLNEGEEVALRSPEAIEAFKMLNPKYRKKKMEEMGLTEEDYYAKQFEIKGEIPEPLVTKWSGPLVVRLVPPRDWPPRGWEVDRKELAFIREAHKMQARRVSLEEVANDVRTETDDVCVDRYKVFLKQYKEWVEANKDRLEEESYKQDQDYYPGRRKRGKDYKEGMYELPFYYPGQICLGKVTMLHLYQGAFVDIGGVHDGWVPIKNNDWYWIRHHIKVGMHVIVEITVSISYCFFFFIFVSFHDSCVYSINGFLLPFCSLIYIFISQAKRDPYRFRFPIELRFVDPNIDHLIFNRFDSPPIFHRDEDTNEDELRRDCGRPPVPRKDPGDKPQEESLLSNHPYVEKLWQINVAEQMILDDMVINPDKYKGKKMSELDDEEDFNEENAVQYTKAYYKNTLLPKTILKTSVKELDLEAALAERELHTKLRKQANERGEKYKITKLRRNDEMDDYDYMHWRRSFEEREALLRDISCRKALDLPLEEPGRYVDASYFGNDQYDPTSPLYRYDYWGEPKNSEKSMQDRMADIHNKRIVGKGTVWYEMSYEDCIKQQMEREALSKGQQDQEVYNEDTKHSEDEDEDEDEDDDDFDFSILSSLGNNFSDQPRVNGTESSGISGEGMFQD* 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0271 721 MobiDBLite consensus disorder prediction 654 721 - -
Apr1g0271 721 Coils Coil 508 533 - -
Apr1g0271 721 MobiDBLite consensus disorder prediction 403 433 - -
Apr1g0271 721 PANTHER PROTEIN PLASTID TRANSCRIPTIONALLY ACTIVE 10 37 328 IPR044967 GO:0000427|GO:0003723
Apr1g0271 721 PANTHER PROTEIN PLASTID TRANSCRIPTIONALLY ACTIVE 10 368 707 IPR044967 GO:0000427|GO:0003723
Apr1g0271 721 MobiDBLite consensus disorder prediction 403 435 - -
Apr1g0271 721 MobiDBLite consensus disorder prediction 691 721 - -
Apr1g0271 721 MobiDBLite consensus disorder prediction 671 689 - -
Apr1g0271 721 MobiDBLite consensus disorder prediction 654 670 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0271 - - aprc:113863612 1404.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0271 1 3129612 3138698 Apr1g0271 1 3129612 3138698 ECH