Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0264 ATGCTGAAATCAACGTTCTCTCCCATTTTTTGGGTGCTTTCTCCAAAACCTAAGTCTCCAAAAGTATCATCTCACACAATCTTCCGAAACAGCACGCCACATGTTCGCTACAACGCCTCTTTCAACACCTCACCACTCCCACACCCTTCATCAGCTTACATTCACCTCCCTTTCTGTCGAAAACGTTGCCACTACTGTGACTTCCCCATCGTCGCTCTTGGCTCCTCTTCAACCCAAACACACGACGACCCACGAGTCTCGAACTACATACACTGGCTCTGCAGAGAAATCAACGCAACCCAAGTGGAACAACTCAATGCCACGACCCCTCTTCAAACGGTCTATTTTGGTGGTGGAACACCCTCCCTCGTACCTCCTAGGATGGTTTCCTCGGTTTTGGAGACTCTGAGGATGAAGTTTGGGTTGAGTGAGGATGCTGAAATATCAATGGAAATGGACCCGGGCACGTTTGATGCCAACAAGATGCGAGAGATGATGCTGTTGGGAGTTAACAGAGTGTCTTTGGGGGTTCAAGCATTTCAGGAGAAGCTTTTGAGGGCTTGTGGAAGAGCACATGGCGTGAAAGAGGTTCATGAAGCTATTGACATTGTTAAGTTATGTGGGATTCAGAATTGGAGTGTAGATCTTATAGCTTCACTGCCTCATCAGACTAGTGATATGTGGGGGGAAAGTCTAAGGCTCACCATTGAGGCACAACCAACTCATGTTTCAGTTTATGACTTGCAAATTGAGCAAGGCACAAAATTTGGAAGAATATACTCACCAGGGGAATTTCCTCTCCCTTCTGAGGTACAATCAGCTGATTTCTACAAGATGGCTTCAAGCATGCTTTATAATGCAGATTATAACCATTATGAAATCAGCAGCTACTGTAAGAGTGGATACGAGTGCAAACACAATTACACCTATTGGAAGAACAAGCCTTTCTATGGCTTTGGCCTTGGCTCTGCAAGTTTTGTTGGTGGGTTGAGATTTTCGAGGCCGAAGAAGGTGAATGATTACATTAATTTTGTTCAAAATCTAGAAAATGGATTGGTAAATAGCTCAGCTGTTGGCCACATTCAGAGCAAGGACACAGCCATGGATGTGGTCATGCTGTCCCTAAGAACTGCAAGAGGCCTAGACTTGAAGTCTTTTCAAGAATCATTTGGCAGCTCTGTTGTTTTGCCTTTGCTTGAGGCTTATAAACCTTATGTTGAGAGTGGACATGTGATTTGCTTGGATGGGGAGAGGAGAGCCATTAGAGTAGATGATCTCAACAATTCTTTTTTGAATAAAACTAACACAGAAAGGTGGGTGGCTTATGTAAGGCTAAGTGATCCAGAAGGTTTTCTCTTATCAAATGAGCTAATAGCCCTTGCTTTTGGGGTTATTGACTCTTGGAAGGAATGCTCTTCATGCTAA 1425 0.4421 MLKSTFSPIFWVLSPKPKSPKVSSHTIFRNSTPHVRYNASFNTSPLPHPSSAYIHLPFCRKRCHYCDFPIVALGSSSTQTHDDPRVSNYIHWLCREINATQVEQLNATTPLQTVYFGGGTPSLVPPRMVSSVLETLRMKFGLSEDAEISMEMDPGTFDANKMREMMLLGVNRVSLGVQAFQEKLLRACGRAHGVKEVHEAIDIVKLCGIQNWSVDLIASLPHQTSDMWGESLRLTIEAQPTHVSVYDLQIEQGTKFGRIYSPGEFPLPSEVQSADFYKMASSMLYNADYNHYEISSYCKSGYECKHNYTYWKNKPFYGFGLGSASFVGGLRFSRPKKVNDYINFVQNLENGLVNSSAVGHIQSKDTAMDVVMLSLRTARGLDLKSFQESFGSSVVLPLLEAYKPYVESGHVICLDGERRAIRVDDLNNSFLNKTNTERWVAYVRLSDPEGFLLSNELIALAFGVIDSWKECSSC* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0264 474 PANTHER RADICAL S-ADENOSYL METHIONINE DOMAIN-CONTAINING PROTEIN 1, MITOCHONDRIAL 3 464 - -
Apr1g0264 474 TIGRFAM hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 51 403 IPR004559 GO:0004109|GO:0005737|GO:0006779|GO:0051539
Apr1g0264 474 SFLD anaerobic coproporphyrinogen-III oxidase like 49 412 - -
Apr1g0264 474 PANTHER COPROPORPHYRINIGEN III OXIDASE 3 464 IPR034505 -
Apr1g0264 474 SMART MiaB 49 279 IPR006638 GO:0003824|GO:0051536
Apr1g0264 474 Gene3D tm_1862 like domain 57 265 IPR023404 -
Apr1g0264 474 SUPERFAMILY Radical SAM enzymes 40 416 - -
Apr1g0264 474 Pfam Radical SAM superfamily 54 234 IPR007197 GO:0003824|GO:0051536
Apr1g0264 474 SFLD HemN-like, clustered with heat shock genes 49 412 IPR004559 GO:0004109|GO:0005737|GO:0006779|GO:0051539
Apr1g0264 474 ProSiteProfiles Radical SAM core domain profile. 44 290 IPR007197 GO:0003824|GO:0051536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0264 - K07739 gmx:100779022 787.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0264 1 3001135 3003324 Apr1g0264 1 3001135 3003324 ECH