Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0261 ATGGTTAGGGCTCGTGAGAACTGGGAGAAGCTGGTTCGAGCGACGCTGAAGAGGGAGCAGCTGAGAAATGCAGGCCAAGGCCATGCCAGAGTTCCCAGCGGAATCGCCGGCGCTGTTCCTCCTTCACTCGCTCAAACCACCAACATTGATTTGATCTTGCAGGCCGCCGACGAGATTCAATCGGAGGACCCTAACGTCGCTAGGATCTTGTGCGAGCAGGCATATACTATGGCTCAAAATCTTGATCCCAACAGTGATGGTAGGGGAGTTCTTCAGTTCAAGACTGGTTTGATGTCTGTAATCAAGCAAAAACTTGCTAAGAAGGATGGGGTGCGGATTGATCGCAATCGTGACATTGAAAACCTGTGGGAGTTTTATAAACGGTACAAGCAACGTTACAGAGTGGATGACATCCAACGAGAAGAACAAAAATTGCAAGAATCTGGAACTTTTAGCTCCACCCTGGATGAATCATCAGAAATGAGAAAGATAATTGCCACATTACGAGCTTTAGTGGAGGTCATGGAGGTGCTTAGCAAGGATGCTGATCCCAGTGGAGTTGGAGGGCTCATAATGGAGGAGTTGAGAAGAATAAAAAATTCAGGTGTGACGTTATCTGGAGAGCTGACACCATACAACATTATTCCTCTGGAAGCTCCATCACTAACCAATCCTATCAGAATTTTCCCAGAAGTTAAAGCGGCAATATCTGCAATTAGATATACTGAACAGTTCCCTAGACTTCCTCCTGGATTTAAAGTATCTGGACAAAGGGATGCAGACATGTTTGATCTTTTGGAATTTGTGTTCGGTTTTCAGAAAGATAATGTAAGGAATCAGCGTGAAAATGTTGTTTTGATGATAGCAAATAAGCAGTCTCGACTTGGCATACCTGCTGAAACTGATCCAAAAATAGATGAGAAAACTGTCAATGAAGTCTTCTTGAAGGTGCTTGATAACTATATCAAGTGGTGTAGATACTTGCGAATTCGCCTTGCATGGAATAGTTTAGAGGCAATTAACCGTGATCGGAAACTTTTTTTGGTTTCCCTGTATTTTCTTATTTGGGGTGAAGCTGCAAATGTCCGATTTCTTCCTGAGTGCATTTGCTATATATTCCACCATATGGCAAAAGAGTTGGATGCTTTATTGGATCGTGGAGAAGCTGAACCTGCAATCAGCTGCGTAACTGATGATGGTTCTACAAAATTTCTTGAGAAAATAATTTGTCCTATCTATAAAACGCTAGCTGAAGAGGCTGCCAGAAATAATAATGGAAAAGCTGCACATTCAGCATGGCGGAATTATGATGACTTCAATGAATACTTTTGGTCACCTGCTTGTTTTGAATTAAGCTGGCCAATGAGGACGGATTCACCGTTCTTGCGTAAACCTAAAAAATCAAAAAGGACTGGGAAAAGCAGTTTTGTTGAGCATAGAACGTTTCTTCACTTGTATCAAAGTTTTCATCGTCTTTGGATCTTCTTGGCATTAATGTTTCAGGCTTTGACAATCATTGCTTTCCACCATGGACATATTAACTTGGATACTTTCAAAATAATACTTAGCATTGGGCCGTCATTTGCAATCATGAATTTCATCAAGAGTTGCTTAGATGTGTTGCTTACTTTTGGGGCATACACCACTGCAAGGGGCATGGCTGTTTCAAGACTAGTTATAAGGTTCTTTTGGGGTGGCTTGACGTCCGTGTTTGTAACATATGTTTACCTGAAGGTTTTGCAGGAGAGAAATAGTCATAACTCTGACAATTCATTCTATTTTCGGATATACCTTCTTGTACTTGGTGTTTATGCTGCTCTACGTCTATTCCTTGCGCTGTTGCTCAAATTTCCAGCTTGTCATGCTCTTTCTGAAATGTCTGATCAGTCATTCTTTCAGTTTTTTAAGTGGATTTATCAAGAAAGATATTATGTTGGACGCGGTCTCTATGAGACAATGAGTGATTACTGCAGGTATGTGGTCTTCTGGTTGGTGGTACTAGCCTGCAAATTCACTTTTGCTTACTTTCTCCAGATTAGACCTCTTGTCAAACCTACCAACATCATTGCTCATATTCCTTCTTTGACTTACTCATGGCATGATTTCATCTCAAAGAATAATAACAATGCCTTGACTATAGTTAGCTTGTGGGCTCCTGTTGTGGCTATTTATCTCATGGATATTCTCATTTGGTACACTGTCATGTCAGCAATTGTTGGTGGTGTAATTGGTGCACGGGCTCGGCTAGGCGAGATTCGTTCAATTGAAATGGTGCATAAACGTTTTGAAAGTTTCCCAGGGGCATTTGTTAAAAGTTTGGCCTCTTCTCAAACAAAAAGGATACCCTTCAGTGCACAATCATCCCAGGATTCTGAAGATATGAACAAAGCATATGCTGCTATGTTTGCTCCATTTTGGAATGAGATAGTTAAAAGCTTGCGCGAGGAGGATTTTATTAGCAATAGGGAAATGGACCTACTTTCTATGCCCAGTAATGCAGGAAGTCTGAGATTAGTTCAATGGCCTTTGTTTCTTCTAAGTAGTAAGATCCTGTTGGCGGTTGATTTGGCTTTGGACTGCACAGATACTCAGGCAGATCTATGGAGCAGAATATGTAGAGATGAATATATGGCTTATGCTGTTAAGGAATGCTATTACAGTGTTGAAAAAATATTATATTCTGTAGTTGACAGTGAAGGAAGACTTTGGGTGGAAAGAATTTTTCGTGAGATCAAGAACAGTATATTAGAGGGTTCACTTGTGATAACTTTGTCTCTTAAGAAGCTTCCACTTGTTTTATCAAGACTTACAGCTTTGACTGGACTGCTGATTCGAAATAATCCTGAACTTGCTAAAGGTGCTGCAAAAGCTGTATATGAGCTCTATGATGTTGTCACTCATGACTTGGTATCCTCAGATTTGAGGGAGAATCTTGATACATGGAACCTTTTGGCTAGAGCTAGGGATGAAGGACGCCTTTTTTCTAGGATAGTATGGCCTAATGATCCTGAAATTGTAAAGCTCGTGAAACGGTTGCATCTTCTTCTCACTGTAAAGGATTCTGCTGCTAATGTTCCAAAAAATCTTGAAGCCAGGAGAAGATTAGAGTTTTTCACAAATTCATTATTTATGGACATGCCTTCAGCAAAGCCTGTTAGTGAAATGTTGCCGTTCAGTGTTTTCACTCCATACTATAGTGAAACTGTGCTTTATAGTACTTCTGAATTGCAAAAGGAGAATGAAGATGGAATATCAATTCTTTTCTATCTTCAAAAGATATTTCCAGATGAATGGGAAAATTTTCTTGAAAGAATAGGTCGAGGAGCATCCACTGGGGATGTAGAGCTTCAAAGAAGTTCCAGTGACTCTTTGGAACTTCGTTTTTGGGTTTCTTACCGAGGGCAGACTCTAGCGCGAACAGTGCGTGGTATGATGTATTATAGGAGGGCTTTAATGCTGCAAAGCTATCTGGAAAGAAGATCATTGGGAGTGGACAACTATTCTCAAAACAACTTCATTACAAGTCAAGATTTTGAATCATCACGTGAAGCACGGGCACAGGCAGATTTGAAGTTTACGTATGTTGTATCATGCCAAATCTATGGTCAACAAAAGCAGCGGAAGGCGCCAGAAGCTGCTGACATTGCTTTATTGTTACAGAGGAATGAAGCACTCCGAGTTGCTTTCATTCATGTTGATGACAGTACAACTGATGCAAACACACCACGAGTGTTCTATTCAAAGCTTGTCAAAGCTGATATAAATGGAAAAGATCAGGAAATATATTCTATTAAACTTCCTGGAGATCCTAAGCTTGGGGAAGGAAAGCCTGAAAACCAAAACCATGCTATTATTTTCACACGTGGTGATGCTGTTCAAACTATTGACATGAATCAGGACAATTATCTCGAGGAGGCAATGAAAATGAGAAATCTTCTGGAGGAGTTCAATGCAAATCATGGCCTTCGCCCTCCAAGCATTCTTGGAGTTAGGGAACATGTTTTTACCGGAAGTGTCTCATCCTTGGCTTGGTTCATGTCAAATCAAGAAACTAGCTTTGTAACTTTGGCCCAACGAGTTCTAGCAAATCCTCTCAAAGTTCGTATGCACTATGGACACCCAGATGTATTTGACAGAATATTTCACATTACTAGAGGAGGCATTAGTAAGGCATCACGTGTTATTAATATTAGTGAAGATATATATGCTGGTTTCAACTCTACATTGCGCCTTGGAAATATCACACACCATGAATACATTCAGGTTGGGAAGGGTAGGGATGTTGGGTTAAACCAGATTGCCCTCTTTGAAGGGAAAGTGGCAGGTGGTAATGGAGAACAAGTGCTTAGTAGGGATATTTACAGGCTTGGACAACTTTTTGATTTCTTCAGAATGCTTTCTTTCTTCTTCACAACTGTTGGTTATTATGTCTGCACCATGATGACAGTCCTTACGGTGTATATATTCTTATATGGGAGAGCGTACCTGGCATTTTCCGGTCTTGATGAATCTGTCTCAGAAGAGGCAAAAATGATGGGTAACACAGCACTTGATGCAGCTTTGAATGCTCAATTTTTGGTCCAGATTGGTGTTTTTACAGCAGTACCAATGATAATGGGTTTTATACTTGAATTAGGATTGCTGAAGGCTGTTTTCAGTTTCATCACCATGCAACTACAGTTGTGTTCTGTCTTCTTCACGTTCTCATTGGGAACTAGAACTCATTATTTTGGGCGTACTATTCTCCATGGGGGTGCAAAATATCGAGCAACTGGTAGAGGCTTTGTTGTCCGTCACATAAAATTTGCTGAAAATTACAGACTATATTCAAGGAGCCACTTTGTCAAAGCGCTTGAAGTGGCACTACTACTAATAGTTTATATTGCATATGGGTATGCGGAGGGAGGTGCTGTTACGTATGTTTTGCTAACTCTTAGCAGTTGGTTTCTTGTCATTTCTTGGCTTTTTGCTCCTTACATTTTCAATCCCTCTGGTTTCGAGTGGCAAAAGACTGTGGAAGATTTTGATGATTGGACTAGTTGGCTTCTATACAAAGGAGGAGTAGGAGTAAAGGGAGAAAATAGTTGGGAGTCTTGGTGGGACGAGGAACAGATGCATATCCAAACTTTGAGGGGTCGTATTTTAGAGACAATTTTGAGTGCAAGGTTCTTCTTGTTTCAATATGGTGTTGTGTATAAGCTACATCTTACCGGAAAAGATACATCACTTGCGGTATATGGTTTCTCATGGGTTGTCTTGGTTGGAATTGTTTTGATATTTAAGATCTTTACCTACAGCCCAAAGAAATCAGCCGATTTTCAGCTAGTGTTGCGATTTTCACAGGGACTTGCAGCTATAGGCCTTGTTGCAGCAGTGTGTCTTGTTGTTGCCTTTACTCAACTGTCAATAGCAGACCTTTTTGCAAGCATCCTTGCATTTATCCCTACCGGATGGGGAATATTATGTCTGGCAATTGCATGGAAGAAGATAGTTTGGAGTCTTGGTTTGTGGGACTCTGTACGCGAGTTTGCCAGAATGTATGATGCCGGAATGGGTATGATCATTTTTGCACCAATAGCATTTTTATCTTGGTTTCCATTCATTTCCACTTTCCAGTCTCGCCTTCTCTTTAATCAAGCCTTTAGCCGTGGTCTTGAAATCTCTCTCATCCTTGCTGGAAATAAAGCTAATGTTGAGGCTTAA 5703 0.4068 MVRARENWEKLVRATLKREQLRNAGQGHARVPSGIAGAVPPSLAQTTNIDLILQAADEIQSEDPNVARILCEQAYTMAQNLDPNSDGRGVLQFKTGLMSVIKQKLAKKDGVRIDRNRDIENLWEFYKRYKQRYRVDDIQREEQKLQESGTFSSTLDESSEMRKIIATLRALVEVMEVLSKDADPSGVGGLIMEELRRIKNSGVTLSGELTPYNIIPLEAPSLTNPIRIFPEVKAAISAIRYTEQFPRLPPGFKVSGQRDADMFDLLEFVFGFQKDNVRNQRENVVLMIANKQSRLGIPAETDPKIDEKTVNEVFLKVLDNYIKWCRYLRIRLAWNSLEAINRDRKLFLVSLYFLIWGEAANVRFLPECICYIFHHMAKELDALLDRGEAEPAISCVTDDGSTKFLEKIICPIYKTLAEEAARNNNGKAAHSAWRNYDDFNEYFWSPACFELSWPMRTDSPFLRKPKKSKRTGKSSFVEHRTFLHLYQSFHRLWIFLALMFQALTIIAFHHGHINLDTFKIILSIGPSFAIMNFIKSCLDVLLTFGAYTTARGMAVSRLVIRFFWGGLTSVFVTYVYLKVLQERNSHNSDNSFYFRIYLLVLGVYAALRLFLALLLKFPACHALSEMSDQSFFQFFKWIYQERYYVGRGLYETMSDYCRYVVFWLVVLACKFTFAYFLQIRPLVKPTNIIAHIPSLTYSWHDFISKNNNNALTIVSLWAPVVAIYLMDILIWYTVMSAIVGGVIGARARLGEIRSIEMVHKRFESFPGAFVKSLASSQTKRIPFSAQSSQDSEDMNKAYAAMFAPFWNEIVKSLREEDFISNREMDLLSMPSNAGSLRLVQWPLFLLSSKILLAVDLALDCTDTQADLWSRICRDEYMAYAVKECYYSVEKILYSVVDSEGRLWVERIFREIKNSILEGSLVITLSLKKLPLVLSRLTALTGLLIRNNPELAKGAAKAVYELYDVVTHDLVSSDLRENLDTWNLLARARDEGRLFSRIVWPNDPEIVKLVKRLHLLLTVKDSAANVPKNLEARRRLEFFTNSLFMDMPSAKPVSEMLPFSVFTPYYSETVLYSTSELQKENEDGISILFYLQKIFPDEWENFLERIGRGASTGDVELQRSSSDSLELRFWVSYRGQTLARTVRGMMYYRRALMLQSYLERRSLGVDNYSQNNFITSQDFESSREARAQADLKFTYVVSCQIYGQQKQRKAPEAADIALLLQRNEALRVAFIHVDDSTTDANTPRVFYSKLVKADINGKDQEIYSIKLPGDPKLGEGKPENQNHAIIFTRGDAVQTIDMNQDNYLEEAMKMRNLLEEFNANHGLRPPSILGVREHVFTGSVSSLAWFMSNQETSFVTLAQRVLANPLKVRMHYGHPDVFDRIFHITRGGISKASRVINISEDIYAGFNSTLRLGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDIYRLGQLFDFFRMLSFFFTTVGYYVCTMMTVLTVYIFLYGRAYLAFSGLDESVSEEAKMMGNTALDAALNAQFLVQIGVFTAVPMIMGFILELGLLKAVFSFITMQLQLCSVFFTFSLGTRTHYFGRTILHGGAKYRATGRGFVVRHIKFAENYRLYSRSHFVKALEVALLLIVYIAYGYAEGGAVTYVLLTLSSWFLVISWLFAPYIFNPSGFEWQKTVEDFDDWTSWLLYKGGVGVKGENSWESWWDEEQMHIQTLRGRILETILSARFFLFQYGVVYKLHLTGKDTSLAVYGFSWVVLVGIVLIFKIFTYSPKKSADFQLVLRFSQGLAAIGLVAAVCLVVAFTQLSIADLFASILAFIPTGWGILCLAIAWKKIVWSLGLWDSVREFARMYDAGMGMIIFAPIAFLSWFPFISTFQSRLLFNQAFSRGLEISLILAGNKANVEA* 1901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0261 1900 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 345 453 IPR026899 -
Apr1g0261 1900 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 1 1898 - -
Apr1g0261 1900 Pfam 1,3-beta-glucan synthase component 1025 1798 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Apr1g0261 1900 Coils Coil 1299 1319 - -
Apr1g0261 1900 SMART FKS1_dom1_2 343 456 IPR026899 -
Apr1g0261 1900 PANTHER BNAC03G35120D PROTEIN 1 1898 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0261 Apr-Chr1 2911194 2964083 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0261 1 1900 Glycosyltransferase AT2G36850 78.133 0.0 3130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0261 K11000 - gmx:100777959 3536.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0261 1 2911194 2964083 Apr1g0261 1 2911194 2964083 ECH