Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0257 ATGAAACGATTTTTCAAAGTAGTAGGCAAAGATTCAGATGGGTGTGTGAAGAAGCCGAGGGAGAATGAAACTGAGGCTGAGACAGAAGCGACTACAAAGAATCAAAAAGAGCCTTTGAAGTTTATGAGTTGGAATGCCAACAGTTTTCTCCTTCGGGTCAAAAACAATTGGCGCGAATTCACCAATCTCGTCACCACTTTCGATCCTGATGTCATTGCCATACAGGAAGTGCGAATGCCTGCTGCTGGCTCCAAGGGTGCGCCTAAAAATCAGGGAGAAATAAAAGATGATACAAGCTCTGCCAGGGAAGAAAAGCAGATAGTAATGCGTGCACTTTCAACTCCACCTCTTGGGAACTATCATGTTTGGTGGTCTCTTGCAGATTCAAAGTATGCAGGAACAGCACTACTGGTGAAAAAATGCTGCAAGCCAACACGTGTTGTTTTCAATCTTGATAAAATAGTTTCAAAGCATGAGCCAGATGGTCGAGTAATCCTAGCTGAATTTGAAACATTACGCTTATTGAATACATATGTACCCAACAATGGATGGAAAGAGGAGGCAAACTCATTTCAAAGGAGAAGAAAATGGGACAAAAGGATTCTGGAATTTGTTACACAAAATTCAGACAAGCCTTTAATATGGTGTGGGGATCTGAATGTCAGCCATGAAGAGATCGATGTGAGTCATCCAGAGTTTTTCAGTGCTGCAAAACTCAATGGTTACATTCCTCCAAATAAAGAGGATTGTGGGCAGCCTGGGTTTACCTTGGCAGAAAGAAAACGGTTCGGTACCATCTTAAGAGAGGGAAAGCTGATAGATGCCTATAGATTTCTGCACAAGGATAAGGACATGGAACGAGGTTTCTCATGGTCCGGAAACCCAATTGGGAAGTATCGTGGAAAGCGGATGAGAATAGACTATTTTATAGTTTCAGAAAAACTTAAAGAAATGATTGTTGCATGTGAAATGCATGGACAGGGGATAGAGTTACAAGGGTTCTATGGAAGTGATCATTGTCCAGTTACCTTGGAGCTATCTCCTGGTTCTAATTCTGAAGACAAGGATCCATTATAA 1077 0.4169 MKRFFKVVGKDSDGCVKKPRENETEAETEATTKNQKEPLKFMSWNANSFLLRVKNNWREFTNLVTTFDPDVIAIQEVRMPAAGSKGAPKNQGEIKDDTSSAREEKQIVMRALSTPPLGNYHVWWSLADSKYAGTALLVKKCCKPTRVVFNLDKIVSKHEPDGRVILAEFETLRLLNTYVPNNGWKEEANSFQRRRKWDKRILEFVTQNSDKPLIWCGDLNVSHEEIDVSHPEFFSAAKLNGYIPPNKEDCGQPGFTLAERKRFGTILREGKLIDAYRFLHKDKDMERGFSWSGNPIGKYRGKRMRIDYFIVSEKLKEMIVACEMHGQGIELQGFYGSDHCPVTLELSPGSNSEDKDPL* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0257 358 PANTHER DNA-(APURINIC OR APYRIMIDINIC SITE) LYASE 28 348 - -
Apr1g0257 358 MobiDBLite consensus disorder prediction 81 101 - -
Apr1g0257 358 Pfam Endonuclease/Exonuclease/phosphatase family 42 339 IPR005135 GO:0003824
Apr1g0257 358 TIGRFAM xth: exodeoxyribonuclease III (xth) 39 346 IPR004808 GO:0004518|GO:0006281
Apr1g0257 358 ProSiteProfiles AP endonucleases family 1 profile. 39 348 IPR004808 GO:0004518|GO:0006281
Apr1g0257 358 CDD Ape1-like_AP-endo 39 346 - -
Apr1g0257 358 Gene3D Endonuclease/exonuclease/phosphatase 10 348 IPR036691 -
Apr1g0257 358 PANTHER AP ENDONUCLEASE 28 348 IPR004808 GO:0004518|GO:0006281
Apr1g0257 358 SUPERFAMILY DNase I-like 39 346 IPR036691 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0257 - - gmx:100817167 640.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0257 1 2839579 2844313 Apr1g0257 1 2839579 2844313 ECH