Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0256 ATGGCAGCGAGCAGCATCACCATCTCAATTTCCTCATCTTCACTCTTCACTCCAACTCAACCAAAAACCCAATGCCTCCTCAAACAAAAACATCATCATCAAATTCCAGCATCCTCTTTCATGGGTAACACTCTTAAAATATCAACATCATCAACATTCCCAATTACTACAACAAGTCGTAGGTTGTTGAGTTGCTCAGCCTCGGCGTCTTCCTCTTCCACTCTTCCCTCCGCCCTTCTGTTTGACTGTGACGGAGTCCTTGTTGACACCGAGAAAGATGGCCACCGCATATCTTTCAACCAAACCTTCCAAGAGAGAGAACTAGGCGTCACCTGGGATGTGGACTTGTACGGGGAATTGCTCAAAATTGGAGGGGGAAAAGAAAGGATGACAGCTTTCTTTAACAAGACAGGTTGGCCTGAGAATGCCCCCACAAGTGAACAAGAAAGAAAAGAATTTGTAGCTTCACTTCACAAGCAAAAGACGGAACTATTCATGGCACTTATAGAGAAAAAACTGTTGCCTCTTCGCCCAGGTGTTGCAAAGCTTATCGATCAGGCTTTAGCTCAAGGAGTCCATGTTGCAGTTTGCAGCACTTCCAATGAGAAGGCGGTCTCTGCAATAGTATCATTCTTGCTGGGAACTGAGCGCGCAGAAAAAATCAAGATATTTGCAGGAGATGTGGTTCCCCGTAAAAAGCCTGATCCAGCCATCTATCTATTAGCAGCCAGCACTCTGGGTGTTGAACCTTCAAGATGTGTTGTGGTGGAGGACAGTGCCATAGGCCTTGCAGCTGCTAAAGCAGCTGGAATGAAATGCATAATAACAAAGAGCGGCTATACAGCAGATGAAGATTTCTTGGATGCAGATGCAGTCTTTGACTGCATTGGTGATCCTCCTGAGGAGAGATTTGATTTGGCATTCTGTGGTAACCTTCTTGAGAAGCAATACGTGAGCTAG 960 0.4552 MAASSITISISSSSLFTPTQPKTQCLLKQKHHHQIPASSFMGNTLKISTSSTFPITTTSRRLLSCSASASSSSTLPSALLFDCDGVLVDTEKDGHRISFNQTFQERELGVTWDVDLYGELLKIGGGKERMTAFFNKTGWPENAPTSEQERKEFVASLHKQKTELFMALIEKKLLPLRPGVAKLIDQALAQGVHVAVCSTSNEKAVSAIVSFLLGTERAEKIKIFAGDVVPRKKPDPAIYLLAASTLGVEPSRCVVVEDSAIGLAAAKAAGMKCIITKSGYTADEDFLDADAVFDCIGDPPEERFDLAFCGNLLEKQYVS* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0256 319 PANTHER XYLULOSE-1,5-BISPHOSPHATE (XUBP) PHOSPHATASE 55 318 IPR044999 GO:0016787
Apr1g0256 319 PANTHER CBBY-LIKE PROTEIN 55 318 - -
Apr1g0256 319 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 158 275 IPR006439 -
Apr1g0256 319 CDD HAD_CbbY-like 81 278 - -
Apr1g0256 319 SFLD phosphoglycolate phosphatase 74 302 - -
Apr1g0256 319 Pfam Haloacid dehalogenase-like hydrolase 79 275 IPR041492 -
Apr1g0256 319 SUPERFAMILY HAD-like 77 298 IPR036412 -
Apr1g0256 319 Gene3D - 78 295 IPR023214 -
Apr1g0256 319 Gene3D Putative phosphatase; domain 2 90 174 IPR023198 -
Apr1g0256 319 SFLD C1.5.6: HAD, Beta-PGM, Phosphatase Like 74 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0256 Apr-Chr1 2834167 2838412 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0256 - - pvu:PHAVU_009G169900g 487.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0256 1 2834167 2838412 Apr1g0256 1 2834167 2838412 ECH