Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0250 ATGGCTACGAGTGGAGTCAATGACGCACAGCACAACCCGGCTCATGACCCGGATTTGGATACTCCGGATAACCCGGATCACGAGTTGGCTCAGTTCGGAGCGGGTTGCTTCTGGGGTGTGGAGTTGGATTTTCAGAGAGTTGAGGGAGTGGTCAAAACTGAGGTTGGATATTCGCAGGGTCGCACTCCTGATCCCAACTACAAGCTGGTCTGCACCGGAACCACAAACCATGTTGAAGTGGTTCGGGTTCAGTTCGACCCGAAACTTTGCCCCTACGCAAACCTCCTCGCTCTCTTTTGGTCTCGACATAACCCCACTACCATCAACCGCCAGGGGCATGATGTGGGAACACAGTATAGATCAGGAATATACTACTACAATGAAACACAGGGTCGTTTAGCTCAAGAATCGAAAGAAGCTAAGCAGTTGGGGTTGAAGGAGAAGATTGTGACAGAAATACTTCCAGCAAAGAGGTTTTACAGAGCAGAGGAATATCATCAACAGTATCTCGAGAAGGGTGGAGGTCAAGGCAACAAACAGTCTGCTGAAAAGGGGTGCACTGATCCCATCAGGTGCTATGGCTGA 585 0.5009 MATSGVNDAQHNPAHDPDLDTPDNPDHELAQFGAGCFWGVELDFQRVEGVVKTEVGYSQGRTPDPNYKLVCTGTTNHVEVVRVQFDPKLCPYANLLALFWSRHNPTTINRQGHDVGTQYRSGIYYYNETQGRLAQESKEAKQLGLKEKIVTEILPAKRFYRAEEYHQQYLEKGGGQGNKQSAEKGCTDPIRCYG* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0250 194 Gene3D Peptide methionine sulphoxide reductase MsrA 15 194 IPR036509 GO:0008113
Apr1g0250 194 PANTHER MITOCHONDRIAL PEPTIDE METHIONINE SULFOXIDE REDUCTASE 8 194 - -
Apr1g0250 194 SUPERFAMILY Peptide methionine sulfoxide reductase 22 175 IPR036509 GO:0008113
Apr1g0250 194 MobiDBLite consensus disorder prediction 1 26 - -
Apr1g0250 194 PANTHER PEPTIDE METHIONINE SULFOXIDE REDUCTASE FAMILY PROTEIN 8 194 - -
Apr1g0250 194 Pfam Peptide methionine sulfoxide reductase 30 173 IPR002569 GO:0008113
Apr1g0250 194 Hamap Peptide methionine sulfoxide reductase MsrA [msrA]. 27 184 IPR002569 GO:0008113
Apr1g0250 194 TIGRFAM msrA: peptide-methionine (S)-S-oxide reductase 29 172 IPR002569 GO:0008113
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0250 Apr-Chr1 2715466 2717275 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0250 K07304 - gmx:100527085 357.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0250 1 2715466 2717275 Apr1g0250 1 2715466 2717275 ECH