Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0243 ATGACGATCACGGCGGTGCCAACGATAAAGGACGATTGCCTTATGGTGAGGGGCAAGGTGGTTTTGACCCGTGTGCCCCCAAACATTGTGCTTTCTACGGCTGGAACAGGCTCCGTTTTCTTGGGTGCAACTTCAACTGTTCAAAGTTCCCGTCATGTTTTCACTCTTGGCATTCTCCAGGGATATAAGTTGGTGTCTCTGTTCAGAGTGAAGATATGGTGGATGATACCACGTGTAGGGAGATGTGCATGTGATATTCCCATGGAAACTCAGTTGCTGCTACTGGAAGCAAGAGAAGAGTGTGCCCTTGAGGATGAATTTTCTTCTGACTCTGAAGAACCAAATGCAGAGAACACTTGCTACATTCTCTTCTTGCCTGTTTTGGATGGACAGTTTCGCGCAACTTTGCAGGGAACTCCATCAAATGAGCTCCAGTTCTGCATTGAAAGTGGAGACGCCCATGTCCAAACATCCCAATCACTCGAAGCGGTATTTGTAAATTCAGGGGATAATCCATTTGAGTTAATCAAGGATTCCATCAAGATATTGGAGAAACTCAAAGGAACATTCTGTCATCTTGAAAACAAGAAGATCCCATCACATCTTGATTGGTTTGGATGGTGCACTTGGGATGCTTTTTACACTGAAGTGAGTCCACAAGGAATAAGAGTTCTCTCAAATGGAGGTTGTTCACCAAAGTTCATCATCATTGATGATGGATGGCAAGAGACACTCAATGAGTTTCACAAAGATGGTGAACCAATAATTGAAGGAACTCAATTCGCAACCAGACTGGTAGACATTAAAGAAAACAAAAAGTTCACTAATGCAGGCTCTGGACATTCTTGCAACAATCTCCGCGATTTTGTTGACTCTATCAAACAGAATTTGAGTGTAAAATATGTTTACATGTGGCATGCTTTAGCTGGTTATTGGGGAGGAGTACTCCCCTCATCAGATGCAATGAAGAAATATAATCCAAAGCTTGTATATCCAATTCAATCACCTAGCACTACAGGGAACCTTAGAGATATAGCCATGGACAGCTTGGAAAAATATGGAGTGGGAATCATAGACCCACAAAAGCTCTACGACTTTTACAATGACTATCACAGTTATCTTGCTAGCTGTGGCATTGATGGAGTTAAAGTAGATGTCCAAAATTTAATAGAAACCTTAGGTTCTGGGTATGGTGGACGTGTTTCATTGACCAAGCGGTATCAAGAAGCATTAGAGCAATCTGTAGCAAGGAACTTTACGGACAACAATCTCATTTGCTGCATGTCCCACAACTCTGATTCAATTTACAGCTCAAAGAAGAGTGCAGTAGCAAGAGCATCTGAGGACTTCATGCCAAGAGAACCAACATTTCAAACCCTACACATTGCCTCTGTAGCTTTTAATAGTCTTCTTCTGGGGGAGATATTTGTGCCAGACTGGGACATGTTCCATAGCAAGCATGAGACAGCTGAGTTCCATGCTGCAGCAAGAGCAATAGGTGGTTGTGCAGTATATGTTAGTGATAAGCCTGGGAATCATGATTTTAAAATCCTCAAGAAGCTAGTGCTATCTGATGGATCAGTATTGAGAGCAAGATATGCTGGCCGTCCTACTCGAGATTGTTTATTTAAAGACCCCGTGATGGATGGTAAAAGTCTGCTGAAAATTTGGAACATGAATATTCTAACTGGGGTCATAGGCGTCTTCAATTGCCAAGGAGCAGGAAGCTGGCCATTGAAATCATTGAAATCTGCACCCTCTCACATCACCATTTCAGGGAAAGTGAGACCCCTTGATGTAGAATTTCTTCAAGAGGTTGCAGGAGAAAACTGGAATGGAGATTGCGTAGTATATGCCTTCAATGCAGGCTTGCTTTCTAAATTGTCAAGCAGAGGGAAACTAGAAGTGTCCCTGGAGACTCTCCAATGTGAAATATATACCGTGTCTCCAATCAGAGTGTTTGGTCACGATGTGCAATTTGCACCAATAGGATTGCTTGACATGTACAATTCAGGAGGAGCTGTAGAAGCTCTGGACTGCACCATGGATGTTTCACAGTGCATAATAAAAACCAAAGGCAGAGGATGTGGTCGTTTTGGTGTGTACTCCAACGTTAGACCCAAACGTTGCGTTGTGGACATGAAGGAGGAGGAGTTCTCCTACAACCTTGAAGATGGACTGTTAACAATTAAACTTGGTAGTGGAGACAATTCAAGGGACGTGGAACTTGTATACTGA 2238 0.4285 MTITAVPTIKDDCLMVRGKVVLTRVPPNIVLSTAGTGSVFLGATSTVQSSRHVFTLGILQGYKLVSLFRVKIWWMIPRVGRCACDIPMETQLLLLEAREECALEDEFSSDSEEPNAENTCYILFLPVLDGQFRATLQGTPSNELQFCIESGDAHVQTSQSLEAVFVNSGDNPFELIKDSIKILEKLKGTFCHLENKKIPSHLDWFGWCTWDAFYTEVSPQGIRVLSNGGCSPKFIIIDDGWQETLNEFHKDGEPIIEGTQFATRLVDIKENKKFTNAGSGHSCNNLRDFVDSIKQNLSVKYVYMWHALAGYWGGVLPSSDAMKKYNPKLVYPIQSPSTTGNLRDIAMDSLEKYGVGIIDPQKLYDFYNDYHSYLASCGIDGVKVDVQNLIETLGSGYGGRVSLTKRYQEALEQSVARNFTDNNLICCMSHNSDSIYSSKKSAVARASEDFMPREPTFQTLHIASVAFNSLLLGEIFVPDWDMFHSKHETAEFHAAARAIGGCAVYVSDKPGNHDFKILKKLVLSDGSVLRARYAGRPTRDCLFKDPVMDGKSLLKIWNMNILTGVIGVFNCQGAGSWPLKSLKSAPSHITISGKVRPLDVEFLQEVAGENWNGDCVVYAFNAGLLSKLSSRGKLEVSLETLQCEIYTVSPIRVFGHDVQFAPIGLLDMYNSGGAVEALDCTMDVSQCIIKTKGRGCGRFGVYSNVRPKRCVVDMKEEEFSYNLEDGLLTIKLGSGDNSRDVELVY* 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0243 745 PANTHER - 1 745 IPR008811 -
Apr1g0243 745 SUPERFAMILY (Trans)glycosidases 201 521 IPR017853 -
Apr1g0243 745 PANTHER GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 2-RELATED 1 745 - -
Apr1g0243 745 Pfam Raffinose synthase or seed imbibition protein Sip1 9 731 IPR008811 -
Apr1g0243 745 Gene3D Aldolase class I 203 522 IPR013785 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0243 Apr-Chr1 2642976 2647260 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0243 1 733 Glycoside Hydrolase AT1G55740 48.735 0.0 696
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0243 - - gmx:100816978 1333.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0243 1 2642976 2647260 Apr1g0243 1 2642976 2647260 ECH