Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0233 ATGGTTTCTTCTAATGGATTAGCTACTAAGCAGCCTCTTTTTTCTTTTGGATTGATTTCTGATGTCCAATATGCTGACATTCCTGATGGTCATTCATTCCTTGGTGTTCCACGGTATTATAGGCATAGTATTCTTGTGTTGCAGAGAGCAATAAAAGAATGGAATACTCATCAGAAGCATAAGTTTGTGATTAATTTTGGAGATATTGTTGATGGATATTGTCCCAAAGATCAATCTCTTGATACTGTGAAGAAAGTAGTGGATGAATTTGAGAAGTTCAGGGGACCCGTGTATCATATGATTGGAAATCATTGCCTGTACAATCTTCCTCGCAGCAAGTTACTTCCGTTATTGAAGATCCAAACTCTTGATGATCATGCTTACTATGATTTCTCACCAGTGCCTGAATATAGATTTGTAGTTCTGGATGGCTATGACATCAGTGCCATAGGTTGGCCTCAAGATCATCCAAAAACAATCGGGGCCTTGAAATGCCTACGTGAGAAGAATCCAAATGAAGATAAGAACAGTCCAACAAATTTGGTGGGGGTTGAAAGAAGGTTTCTCATGTTTAATGGTGCTGTTGGAAAGGAACAGATGGACTGGTTGGATGGTGTTCTGCAGGAGGCAACAACATTGAAACAGAAGGTTGTTGTCTGTTGCCATATGCCTCTAGATCCCGGTGCAGCTTCCAAGGGGTCACTGTTGTGGAATTATGATGAAGTGATGAATTTGATACACCGATACAATTGCGTTAAGGTTTGTCTTGCTGGACATAATCACACAGGCGGATACTGCATTGATTCTCATGGGATACACCATAGAGTTCTTGAAGCTGCTCTGGAATGTCCTCCTGGTACGGATGCATTTGGAAGCATTGATGTCTACGATGACAGAATATGGCTTGTTGGAACTGACCGAATGAAAAGTACAGACATGTATTTTAATCCCGAAGTTAATTTTTAG 966 0.4048 MVSSNGLATKQPLFSFGLISDVQYADIPDGHSFLGVPRYYRHSILVLQRAIKEWNTHQKHKFVINFGDIVDGYCPKDQSLDTVKKVVDEFEKFRGPVYHMIGNHCLYNLPRSKLLPLLKIQTLDDHAYYDFSPVPEYRFVVLDGYDISAIGWPQDHPKTIGALKCLREKNPNEDKNSPTNLVGVERRFLMFNGAVGKEQMDWLDGVLQEATTLKQKVVVCCHMPLDPGAASKGSLLWNYDEVMNLIHRYNCVKVCLAGHNHTGGYCIDSHGIHHRVLEAALECPPGTDAFGSIDVYDDRIWLVGTDRMKSTDMYFNPEVNF* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0233 321 CDD MPP_Nbla03831 14 300 IPR041869 -
Apr1g0233 321 SUPERFAMILY Metallo-dependent phosphatases 12 314 IPR029052 -
Apr1g0233 321 Pfam Calcineurin-like phosphoesterase 15 262 IPR004843 GO:0016787
Apr1g0233 321 PANTHER MANGANESE-DEPENDENT ADP-RIBOSE/CDP-ALCOHOL DIPHOSPHATASE 1 318 - -
Apr1g0233 321 Gene3D - 9 308 IPR029052 -
Apr1g0233 321 PANTHER - 1 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0233 Apr-Chr1 2527771 2531379 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0233 K01517 - gmx:100792911 582.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0233 1 2527771 2531379 Apr1g0233 1 2527771 2531379 ECH