Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0230 ATGCAAGACTCAATTGGGATCCCAGCTTGCTTTTCTTCTGCAGTTAAATCAATCGATGATCATCACACAGCAGTGACACGTTCAGGTCAAAGCGTGCACGTGTCTGTATATAGAACAAAGATCGCTGATCACTGCCGCTTGATAACCATCACATGGTGCAAAAACTTGATGCTTCATGGTTTATCAGTGTCAGTGGAAGGCCCAGAAGGAGAAAGCGAAACCCAATATAGCTGCAAGGTTGAGCTAAAGCCGTGGTACTTTTGGAGAAAACATGGTTCTAAGCGCTTCATGGTAGATGGTAACAAAGCGGTTGACATATTCTGGGACCTTAAAGCTGCAAAGTTTAACGGTGAAACAGAACCAACCTCGGAGTACTATGTAGCAGTGGTTTGTGATGAAGAGGTTGTCTTGCTTCTCGGTGATCTAAAGAAAGAAGCCTATAGAAGAACTGGGTGCAGGCCAGCTCTTATAGACCCAATTTTGGTTTCAAAAAAAGAACACATTTTTGGGAAGAGAAAGTTCTCTACTAGAGCCAAGTTCCACGAGAAGGGTAGGTGCCATGAGATCCAAATTGAGTGCAAGAACAAGGGTATTAACGGAGGAGATTCTTCAAGTGAGGTTCAGCCAGAGATGGAGATAAGATTTGATGGGCACTTGGTGATCCACGTCAAGCACTTGCAATGGAAATTCAGAGGGAACGAGTCAATTCATCTCCACAAAATGAGAGTGGAGGTATATTGGGATGTTCATGATTGGCTCTTTAGTCCTGGTTTGAAACATGCTTTGTTCATTTTTAAGCCTAGTTTATCCTGCACCACATCAATGTCATCATATAATTCACTATCATCATCGTCATCACCACCGTTATCATCTTCATCCACACCATTATCAACTCAAACGGGTAGTTCTGGGTCAGTGGAGGGGTTTACTGTCAGTGAGTCCTCGGAATTTTGTTTGTTTCTATACGCTTGGAAGGTTGAATGA 984 0.4299 MQDSIGIPACFSSAVKSIDDHHTAVTRSGQSVHVSVYRTKIADHCRLITITWCKNLMLHGLSVSVEGPEGESETQYSCKVELKPWYFWRKHGSKRFMVDGNKAVDIFWDLKAAKFNGETEPTSEYYVAVVCDEEVVLLLGDLKKEAYRRTGCRPALIDPILVSKKEHIFGKRKFSTRAKFHEKGRCHEIQIECKNKGINGGDSSSEVQPEMEIRFDGHLVIHVKHLQWKFRGNESIHLHKMRVEVYWDVHDWLFSPGLKHALFIFKPSLSCTTSMSSYNSLSSSSSPPLSSSSTPLSTQTGSSGSVEGFTVSESSEFCLFLYAWKVE* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0230 327 PANTHER EXPRESSED PROTEIN 1 327 IPR008586 -
Apr1g0230 327 PANTHER OS01G0909400 PROTEIN 1 327 - -
Apr1g0230 327 Pfam Plant protein of unknown function (DUF868) 29 325 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0230 Apr-Chr1 2512162 2513339 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0230 7 327 EF-hand Containing Proteins AT5G28150 36.420 3.61e-69 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0230 - - gmx:100816323 525.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0230 1 2512162 2513339 Apr1g0230 1 2512162 2513339 ECH
Apr9g3156 9 38342905 38344507 Apr1g0230 1 2512162 2513339 PCT