Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0226 ATGGCCACAAGTTGCTCCTACATGGTCTCAACCAAGTTATCCATGTTGGGTTGGACTGGAGGAAGAAGAGAAGTGAGAAGCAGGAGAGCATTTTTCGTTTCAGCTCAACAACAATCTGATGTTGAGGAAGCAGAGAAAGTGAAGGTGCAAGAAGAACAAGTTGAAAGTCAGCAACCGAAGCCAAAAGGAACAATTCCAAGGCCAGTGGAACCTCAGCGGAATGTAAAAAGCAAAAACATGATCAGGGAATATGGAGGACAGTGGTTGAGCAGTGTCACTCGCCATGTGAGGATCTATGCTGCGTATATCGACCCTGAAACTAGTGCATTTGATCAGACCCAAATGGATAAGCTCACCATTATTCTTGATCCTAGTGATGAGTTTGTGTGGAATCCTGAGACCTGCAACATGGTTTATTCTTACTTTCAGGAGCTTGTGGATCACTACGAGGGTGCTCCATTGACAGAATACACACTTCGCCTGATTGGTTCGGACATAGAGCACTATATAAGAAAACTGTTATATGATGGAGTGATCAAGTATAACATGGATGCAAGGGTTCTGAATTTCAGCATGGGCAAGCCACGGATCATGTTCAACAACGATACCCAACCTGAAGATACAGAGAAATAA 633 0.4376 MATSCSYMVSTKLSMLGWTGGRREVRSRRAFFVSAQQQSDVEEAEKVKVQEEQVESQQPKPKGTIPRPVEPQRNVKSKNMIREYGGQWLSSVTRHVRIYAAYIDPETSAFDQTQMDKLTIILDPSDEFVWNPETCNMVYSYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKLLYDGVIKYNMDARVLNFSMGKPRIMFNNDTQPEDTEK* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0226 210 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT M, CHLOROPLASTIC 1 207 IPR018922 GO:0016655
Apr1g0226 210 Pfam Cyanobacterial and plastid NDH-1 subunit M 89 197 IPR018922 GO:0016655
Apr1g0226 210 MobiDBLite consensus disorder prediction 42 71 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0226 - - gmx:100527195 352.443
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0226 1 2471558 2473571 Apr1g0226 1 2471558 2473571 ECH