Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0220 ATGACTGAGGAGAAGAGAGCTTCGTCGTCGTTCGTGAAGAAGGGTGACCGGCAAATGTTCACGGTGGAGCTCCGGCCAGGTGAGACCACCATAGTGTCATGGAAGAAACTGATGAAAGATGCTAACAAGTTTAACGGATCCACTTCGGTTCCCCAACACCCTGTAATCGCTCCGGGACAACCTGTTGAGGTTGAAGAAAAAGATGCTCCAAACCGTTTCAGTGCTGTAATAGAGAAGATTGAACGCCTTTACATGGGTAAGGATAGTAGTGATGATGAGGATCTGCTTGAGGTTCCTGATGATGATCAGTATGATACCGAAGACTCTTTTATAGATGATGCTGAACTGGATGAATATTTTGAGGTTGATAATTCTGCAATCAAACATGATGGGTTCTTTGTAAATAGGGGGAAATTGGAACGCATAAATGAACCTCCTGTACTCCCTAACCAACAGCCAAAGAAAAGGCGCAGAAAAGATATATTGAAGAATCCTGGTGAAAATAATGATGATCGTGTGTCAAATAAAAATGTAAAAGTTGGCAAGCCAGCATCTGGGAAAGCAGCTTCACTCCAGGCAAAGAGTATGTTCAATTCCTCAGAAAATTTGGTGGCACCTAGTGAACATTATGATGAAGACTTGAAACTTCAGAATCAATTGGATGCCTCTGGCATTGTTTCAAAAAAGAAAGCTGCAGATACTAAACCAATATTGGACCCATCTGTCTCTTTGAAAGCCTCAAGCGATGATGTTTCTGTCTCTGTGACAGAAGCAAAAGATGCTGACAAGCAGAAGATAGGAGCTTTTCAATCTAAGAATATTAGTGATAAATATAGAGATGCAAGTGGATCCTTTGATGGATCTCATCAGAAATACAATGAAAAAATTGCATATGCACATTCCAAATCCCAACCTGGAAGACCACCAAGTATTAATGATTTGGAAAATATCAGTCGGTCAAAAGAAAAAAATGGTATGCGTGAACTGCCAGATCTTAACTTGTTGTCTGAGGGGAAGTCTGCTACGCAAGCAACAAAATATGAAAACATGCCCAAGAAAGATGGTTCTAGTGCTAGGCCAAAAACTTCAATGCTTGAAAGGGCTCTTCGTGAGTTGGAAAAAATGGTTGCAGAATCTAGGCCACCAGCAGTGGATAATCAGGAGGCTGATACTACATCCCAGGCAGTCAAAAGGAGGTTACCAAGAGAAATAAAGTTAAAGCTTGCTAAAGTTGCTAGACTAGCGGCAAGCCAAGGGAAAGTGTCCAAAGAGTTGATTAACCGTCTTATGAGTATTCTTGGGCATCTTATTCAGCTCAGAACATTAAAGAGAAACTTAAAAATAATGATCAATATGGGTCTGTCAGCAAAACAGGAGGAGGATGATAGGTTTCAACAGATAAAGAAGGAAGTTGTTGATATGATTAAGATGCAGGCCCCAATTCTGGAATCCAAGCAACAGCAGAAAGCTGGAACATCTGGTGATTTTCAAGAATTAGGTCCTGATGGAAAAGCAATAACTAAAAGGAAGTTTAGTATGGATGCTGCATTGGAGGACAAGATCTGTGATCTTTATGATCTTTTTGTTGACGGGTTGGATGAAAATGCAGGCCCACAGATCAGAAAGTTGTATGCTGAGCTTGCAGAGTTGTGGCCCAGTGGTTACATGGACAACCATGGGATCAAACGTGGAATTTGCAGGGCAAAAGAGAGGCGCAGAGCACTGTACAACAAACATAAGGAAAAAATTAAGAGGAAAAAGTTGTTGGCACCTAAGCAAGAGGAGAATGTTCGATTTGATTCTAGTTCAATTTCTTCACAGCAGAACCTACGAGAGAGATTAATTCCAGAGTCTAGCAGTCATGCTTTTGCTTCAGGAAACAAGCCAGTTTCTAATACAAGCACAAGTGGCCGGGTCCCCAGTCCAATGAATGGTCTAAAACAGGAAAAGGCAAAGGGAAGTTCAAGCAGTTCCCTGGATGATGTGAGGGTTGCAGATGGTGTTTTAACAAAGAAGGTAAAGAGAAAGCCAGAACTTGAGTTGGAAGTTCCTGAGAAGCTAGCTTCTTTGCAGGGAGAAGAAAGGCCCAAGTCCATAAAGCAGTCTACTGGGCCTCTTCCCACCAAATCAAATGTTCAGCCAACATCTCTCCCTGATCTTGAACAATCAAGCTAA 2175 0.417 MTEEKRASSSFVKKGDRQMFTVELRPGETTIVSWKKLMKDANKFNGSTSVPQHPVIAPGQPVEVEEKDAPNRFSAVIEKIERLYMGKDSSDDEDLLEVPDDDQYDTEDSFIDDAELDEYFEVDNSAIKHDGFFVNRGKLERINEPPVLPNQQPKKRRRKDILKNPGENNDDRVSNKNVKVGKPASGKAASLQAKSMFNSSENLVAPSEHYDEDLKLQNQLDASGIVSKKKAADTKPILDPSVSLKASSDDVSVSVTEAKDADKQKIGAFQSKNISDKYRDASGSFDGSHQKYNEKIAYAHSKSQPGRPPSINDLENISRSKEKNGMRELPDLNLLSEGKSATQATKYENMPKKDGSSARPKTSMLERALRELEKMVAESRPPAVDNQEADTTSQAVKRRLPREIKLKLAKVARLAASQGKVSKELINRLMSILGHLIQLRTLKRNLKIMINMGLSAKQEEDDRFQQIKKEVVDMIKMQAPILESKQQQKAGTSGDFQELGPDGKAITKRKFSMDAALEDKICDLYDLFVDGLDENAGPQIRKLYAELAELWPSGYMDNHGIKRGICRAKERRRALYNKHKEKIKRKKLLAPKQEENVRFDSSSISSQQNLRERLIPESSSHAFASGNKPVSNTSTSGRVPSPMNGLKQEKAKGSSSSSLDDVRVADGVLTKKVKRKPELELEVPEKLASLQGEERPKSIKQSTGPLPTKSNVQPTSLPDLEQSS* 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0220 724 MobiDBLite consensus disorder prediction 93 107 - -
Apr1g0220 724 PANTHER WOUND-RESPONSIVE FAMILY PROTEIN 1 724 - -
Apr1g0220 724 MobiDBLite consensus disorder prediction 620 661 - -
Apr1g0220 724 MobiDBLite consensus disorder prediction 141 190 - -
Apr1g0220 724 MobiDBLite consensus disorder prediction 88 107 - -
Apr1g0220 724 MobiDBLite consensus disorder prediction 151 177 - -
Apr1g0220 724 MobiDBLite consensus disorder prediction 620 724 - -
Apr1g0220 724 MobiDBLite consensus disorder prediction 665 693 - -
Apr1g0220 724 MobiDBLite consensus disorder prediction 336 350 - -
Apr1g0220 724 MobiDBLite consensus disorder prediction 321 362 - -
Apr1g0220 724 MobiDBLite consensus disorder prediction 695 724 - -
Apr1g0220 724 PANTHER CAPZ-INTERACTING PROTEIN AND RELATED PROTEINS 1 724 - -
Apr1g0220 724 Pfam HPC2 and ubinuclein domain 98 140 IPR014840 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0220 Apr-Chr1 2397915 2408468 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0220 - - gsj:114415452 1164.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0220 1 2397915 2408468 Apr1g0220 1 2397915 2408468 ECH
Apr9g0791 9 15211758 15226952 Apr1g0220 1 2397915 2408468 PCT