Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0219 ATGTTGGGATGTGGTCTCTGCACGTGCCACATGGCATTCTCCGTTCACCGGATTATTCCCACCTTCGCCAGACCCTTCCCATTCCGCAGGAACACACACCTCGTCACCGCTCAACTTCCCAACTCTTTTTCCTTCAATTTCGGATTAGATTCTCAGAACTTGAATTCAATTCAATCCCATGATCCGTCACGGTTTCCTTGGATTGGTCCAGTTCCAGGTGACATTGCTGAAGTGGAGGCATATTGTAGGATTTTTAGGAATTCTGAAAGGCTTCATTCTGCGTTGATGGATGCCTTGTGTAACCCTTTCACTGGTGAATGTAGTGTTTCAAATGAGGTTCTGTCCGATGAGAAACCGTTGCTGGAAGATAAAATTGTTTCTGTCCTTGGATGCATGGTAGCCCTTGTGAACAGTGGGAGGCAGGATGTTCTTTCTGGAAGATCTTCAATTGTGACTCCCTTCCGTGCTGCAGGGGTTAGTGTGATGGAGGATACACTGCCTCCGCTTGCCCTTTTCAGGAGCGAGATGAAAAGGTGTTGTGAGAGCTTGCATGTTGCTCTTGAGAACTATTTAATTCTGGGTGATGATCAAAGTTTGGAAGTTTGGAGGAAACTTCAGAGACTGAAGAATGTCTGCTATGATTCTGGCTTTCCTCGAAGAGAGGATTATCCATGTCCTGCTCTATTTGCAAATTGGAGTCCTGTTTATTTATCCACTTCAAAAGAGGACATTGAGTCCAAAGAATCTGAAGCAGCTTTTTGGACAGGTGGGCAAGTAACAGAAGAAGGCCTGAAGTGGTTACTGGATAAAGGGTATAAAACTATTATAGACCTCAGAGAAGAGAATGTAAAAGATAACTTCTATCAAGCTGTTGTGTCTGATGCTATTTCATCTGAAAGTATTGAATTGGTCAAAATCCCTGTTGAAGTTAGGACTGCACCTACAATGGAACAGGTTGAGAAGTTTACATCTTATGTTTCAGATTGCAGCAAAAGGCCGATCTATCTTCACAGCAAGGAAGGAGTTTGGAGAACATCGGCTATGGTCTCCAGATGGAGGCAGTACATGACTCGCTTTGCATCACACTATGTTTCTAATCAAGCAGTTATTTCCAATGAATTGTCATCAGATTATACTAACGAATCTAGGAAACTGCAGGACTCAATGATGCCTGAGGGATCCTCCCTTGAAAAAGATACTAATTTGCTGCAAGAGAGTTTGGGTGCAGCACATGGTTCTATTGGATTTGACACAAGTGCCTCTCCAAAGAAGAATACTGAGAAAACGCAAATTAATGGGGCCATAAGTGAACTCACTCCTGATGATACAGTTTCCTCACAAGCCACTGCTGCTAATGGGGAAGGATCTTTTCCAAGTTTCTTCAGCAAAACTAACCCTTTAGAAGCTCAAGTTCCTCCTTTTGATATCTTTTCCAAGAAAGAGATGTCCAAATTTTTGGGAAGTAGGAAGGTCTCAAAACCCTCTTTCAGTTATGAGGTTAAAAGACTGGAATGTCAGCCAGATTCAAGAAATCTTAAGCCAAAAATTGTGGGTCCAGCACAAAGTTCCAATGGGTCAGCTATTGTCAATTATCCATCTGGACAGCCCCAGATCACAGTTGGTGGCAATTGGAAGTTAGTAAATGTGAATAATTCCACTTCTGCTAGGACAATTGTTAATGGGTTTAGTGAAGGGGAAAGGTATCACAAGAATGATAATGCCAATACCAACTCTGAAAGGATTAGAGATGATAAGGATAAGGCTGGGTTAGCCTTATGTGATGAAGACTTGGGACTTGTTGAAGGAAACATGTGTGTGTCATCAACAGGAGTGGTAAGGGTGCAGTCAAGAAAGAAAGCAGAGATGTTCCTAGTACGAACAGATGGATTTTCTTGTGCCAGGGAGAAGGTTAGCGAATCCTCTTTGGCCTTTACTCATCCTAGCACCCAGCAACAGATGCTTTTGTGGAAATCTATGCCAAAGACTGTGTTACTGTTGAAAAAGCCAGGGGAGCACCTTATGGAAGAAGCTAGAGAGGTTGCTTCTTTTCTATATTACCAAGAGAAAATGAATGTTTTTGTGGAACCTGAGGTGCATGATATATTTGCTAGAATTCCTGGGTTTGGATTTGTTCAGACCTTCTACAGTCATGATACATGTGATCTACACGAGAAAGTTGATTTTGTGGCATGTTTGGGGGGAGATGGTGTTATACTGCATGCTTCAAATCTATTCAGAGGCGCTATTCCACCTGTTGTGTCTTTTAACCTTGGTTCCCTTGGTTTTCTGACCTCTCATAACTTCGAAGACTACAAGCAAGACTTACGACAAGTTATCCATGGTAATGATACACGAGATGGAGTGTACATCACTCTCAGAATGCGTCTCCGATGTGAAATTTTTCGTAAGGGTAAATCTATGCCAGGAAAAGTATTTGATATTCTCAATGAGGTTGTTGTTGATCGGGGTTCTAATCCATACCTTTCAAAGATTGAATGTTATGAACATGGTAGACTTATAACCAAGGTACAAGGTGATGGAGTCATTGTAGCCACCCCAACTGGAAGCACCGCCTATTCTACAGCTGCTGGAGGTTCCATGGTCCATCCAAATGTTCCCTGCATGTTGTTTACCCCAATTTGTCCACATTCACTCTCATTTAGACCAGTAATACTTCCAGATTCTGCTCAACTTGAATTAAAGATTCCAGAGGATGCAAGAAGCAACGCCTGGGTTTCATTTGATGGAAAGAGAAGGCAACAACTTTCAAGAGGAGATTTAGTACGAATATCTATGAGTCAACATCCACTTCCAACAGTTAACAAGTTTGACCAAACAGGTGATTGGTTTCATAGCTTGATTCGCTGCCTAAATTGGAATGAAAGGCTTGATCAAAAGGCCTTATGA 2907 0.4214 MLGCGLCTCHMAFSVHRIIPTFARPFPFRRNTHLVTAQLPNSFSFNFGLDSQNLNSIQSHDPSRFPWIGPVPGDIAEVEAYCRIFRNSERLHSALMDALCNPFTGECSVSNEVLSDEKPLLEDKIVSVLGCMVALVNSGRQDVLSGRSSIVTPFRAAGVSVMEDTLPPLALFRSEMKRCCESLHVALENYLILGDDQSLEVWRKLQRLKNVCYDSGFPRREDYPCPALFANWSPVYLSTSKEDIESKESEAAFWTGGQVTEEGLKWLLDKGYKTIIDLREENVKDNFYQAVVSDAISSESIELVKIPVEVRTAPTMEQVEKFTSYVSDCSKRPIYLHSKEGVWRTSAMVSRWRQYMTRFASHYVSNQAVISNELSSDYTNESRKLQDSMMPEGSSLEKDTNLLQESLGAAHGSIGFDTSASPKKNTEKTQINGAISELTPDDTVSSQATAANGEGSFPSFFSKTNPLEAQVPPFDIFSKKEMSKFLGSRKVSKPSFSYEVKRLECQPDSRNLKPKIVGPAQSSNGSAIVNYPSGQPQITVGGNWKLVNVNNSTSARTIVNGFSEGERYHKNDNANTNSERIRDDKDKAGLALCDEDLGLVEGNMCVSSTGVVRVQSRKKAEMFLVRTDGFSCAREKVSESSLAFTHPSTQQQMLLWKSMPKTVLLLKKPGEHLMEEAREVASFLYYQEKMNVFVEPEVHDIFARIPGFGFVQTFYSHDTCDLHEKVDFVACLGGDGVILHASNLFRGAIPPVVSFNLGSLGFLTSHNFEDYKQDLRQVIHGNDTRDGVYITLRMRLRCEIFRKGKSMPGKVFDILNEVVVDRGSNPYLSKIECYEHGRLITKVQGDGVIVATPTGSTAYSTAAGGSMVHPNVPCMLFTPICPHSLSFRPVILPDSAQLELKIPEDARSNAWVSFDGKRRQQLSRGDLVRISMSQHPLPTVNKFDQTGDWFHSLIRCLNWNERLDQKAL* 969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0219 968 Pfam ATP-NAD kinase N-terminal domain 714 781 IPR002504 GO:0003951|GO:0006741
Apr1g0219 968 SUPERFAMILY NAD kinase/diacylglycerol kinase-like 664 963 IPR016064 -
Apr1g0219 968 Gene3D Protein tyrosine phosphatase superfamily 245 380 IPR029021 -
Apr1g0219 968 Pfam ATP-NAD kinase C-terminal domain 815 941 - -
Apr1g0219 968 Gene3D - 795 935 IPR017437 GO:0003951|GO:0019674
Apr1g0219 968 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 253 355 IPR029021 -
Apr1g0219 968 Hamap NAD kinase [nadK]. 661 959 IPR002504 GO:0003951|GO:0006741
Apr1g0219 968 PANTHER NAD KINASE 19 968 - -
Apr1g0219 968 Gene3D - 650 960 IPR017438 -
Apr1g0219 968 PANTHER NAD/NADH KINASE FAMILY PROTEIN 19 968 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0219 Apr-Chr1 2390180 2396380 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0219 K00858 - gmx:100796381 1646.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0219 1 2390180 2396380 Apr1g0219 1 2390180 2396380 ECH