Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0213 ATGGTTGAGATGGATGCCATTGCCACCAAGAATCATCACCAAACATTTAACGTCTCCACTGACATGCAACAACGAGGAGGCTCTAAGTGTTTCGATGATGATGGTCGCCCCAAAAGAACTGGGACTGTGTGGACTGCAAGTGCACACATAATAACTGCAGTGATTGGGTCAGGGGTGTTGTCATTGGCTTGGGCTATAGCTCAGCTTGGATGGGTTGCTGGTCCTGTTATCATGGTTCTCTTCTCTGTCATTACTTACTACACTTCCATTCTTCTCTCTGATTGTTATCGTACTGGTGACCCTGTCACTGGCAAGAGAAACTACACTTACATGGATGCTATTCATTCAAACTTCGGTGGCAGTGGCTTTAAGGTCAAGCTGTGTGGGCTAGTTCAGTATGTTAACCTTTTTGGAGTTGCCATTGGCTACACTATAGCATCTTCCATAAGCATGATGGCAATTGAAAGATCTAATTGTTTCCACAAGAGTGGAGGAAAAAATCCCTGCCATATGAACAGCAATATGTACATGATTTCCTTCGGTATAGTGGAAATTGTTTTCTCTCAAATTCCAGGCTTTGATCAATTGTGGTGGCTCTCCATTGTGGCTGCTGTTATGTCCTTCACGTATTCCACAATTGGGCTAGGCCTCGGTATTGGAAAAGTTATAGAAAACGGAAGCGTTGGGGGAACCTTAACTGGGATAAGCATTGGTACTGTGACACAAACTGATAAGTTTTGGAGAACCATGCAAGCTCTTGGTGACATAGCCTTTGCCTACTCTTACTCCTTCGTACTTATAGAAATTCAGGACACAGTGAAATCCCCTCCATCAGAGTCAAAAACAATGAGGAAGGCTACTTTTATCAGTGTTGCTGTCACCACTGCTTTCTACATGCTTTGTGGCTGTTTTGGGTATGCCGCATTTGGAGATTCAAGCCCTGGAAACCTTCTCACTGGCTTTGGCTTCTATAACCCATATTGGCTTCTTGACATAGCTAATGCTGCCATAGTGATCCACCTTATTGGTTCATACCAAGTTTGCTGCCAACCCATTTTCGCTTTTATTGAAAAAAATGTTGCACAAAGATTCCCAGATAGTAGTTTTGTGAACAAAGAAATTGAAATCCCCCTCCTTGGTTTTCATCCTTACAAACTAAACTTGTTCAGATTGGTTTGGAGGACAATTTTAGTAATAGTTAATACTGTGATATCAATGCTTCTCCCATTCTTCAATGACATAGGAGGACTTATTGGAGCACTTGGATTTTGGCCACTAACTGTGTATTTCCCGGTGGAAATGTACATTATTCAAAAAGGAATGCCAAAGTGGAGCCCAAAATGGATGTGCCTCCAAATGCTTAGCTTTGCATGCCTTTTAATGACTGTAGGAGCTGCAGCTGGCTCTATTGCTGGAATTATCATTGATCTTCAAACTTGCAAGCCATTCAATACCAACTATTGA 1464 0.4221 MVEMDAIATKNHHQTFNVSTDMQQRGGSKCFDDDGRPKRTGTVWTASAHIITAVIGSGVLSLAWAIAQLGWVAGPVIMVLFSVITYYTSILLSDCYRTGDPVTGKRNYTYMDAIHSNFGGSGFKVKLCGLVQYVNLFGVAIGYTIASSISMMAIERSNCFHKSGGKNPCHMNSNMYMISFGIVEIVFSQIPGFDQLWWLSIVAAVMSFTYSTIGLGLGIGKVIENGSVGGTLTGISIGTVTQTDKFWRTMQALGDIAFAYSYSFVLIEIQDTVKSPPSESKTMRKATFISVAVTTAFYMLCGCFGYAAFGDSSPGNLLTGFGFYNPYWLLDIANAAIVIHLIGSYQVCCQPIFAFIEKNVAQRFPDSSFVNKEIEIPLLGFHPYKLNLFRLVWRTILVIVNTVISMLLPFFNDIGGLIGALGFWPLTVYFPVEMYIIQKGMPKWSPKWMCLQMLSFACLLMTVGAAAGSIAGIIIDLQTCKPFNTNY* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0213 487 PANTHER OS05G0424000 PROTEIN-RELATED 10 481 - -
Apr1g0213 487 Pfam Transmembrane amino acid transporter protein 39 475 IPR013057 -
Apr1g0213 487 PANTHER AMINO ACID CARRIER 10 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0213 Apr-Chr1 2327319 2329258 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0213 11 487 Organic Solute Cotransporters AT1G77380 74.004 0.0 741
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0213 K24917 - gmx:100792389 874.004
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0213 1 2327319 2329258 Apr1g0213 1 2327319 2329258 ECH