Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0204 ATGCCAGCTTCTCCTTCAGGTTTTCTCTTTCTCTCTAAAACCCTCACTCTCTCTCTCTCTCTCTCTTTCTATAATGCCAACCAATTCGCGCGATTCTTAAATTTCATTTTCAATCTCTCACTTCTATTCTCAATTTCCTTTTTCCCTTTTTTCGCAGAGAACCGAACCCGATGGAGGAAGCGCAAGAGAGAATCCCAAATCAACCGGCGCCACCAGAAGCACGACGACGACGAGGAGGAGGAAGAAGAAAACCCCAATGCCGACGAAGACCGCGACTACGATTCCGAGGAACAAACCCACCATAACCCCAACAACCACACTAATTCCCAACAGCATCCCGAGATTGAGGTTCTCTCTGACCACGCTGTTCAGATTTCGCAGTTCCCACTCGTGATTAAGCGTTCCGTCAATCGTCCACATTCCTCTGTTACTTCAATTGTGGCTTTGGAGCGAGCCCTAGAATCTGGAGATAACAAGGCTCAGCTTCATAACCCTCCGTTTCTGGAGAATGTGTCTCATGGTCAGCTTCAAGCGCTTTCTACTGTGCCCTCTGATAGCGCCGCTTTTGATCAGGACCGTTCAGATTCCTCTTATGTTATCACTCCTCCTCCAATTTTGGAAGGTCGTGGCGTTGTTAAGCGTTTTGGAAATAAGACTCTTGTAGTTCCAATGCATTCAGATTGGTTTTCGCCAGCCACAGTGCATAGATTGGAGAGACAAGCAGTGCCTCATTTCTTTTCTGGAAAATCTCAGGATCATACTCCTGAGAAGTACATGGAGTGTAGGAACTATATTGTTGCATTGCACATGGAGGATCCAGGAAAGAGGATTATGGTCTCTGATTGCCAGGGTTTGGTGGCTGGAGTTGATGTTGAAGATTTGACTCGAATTGTCAGGTTCCTTGATCACTGGGGAATCATCAATTACTGTGTTCGGATACCGAGTAATGAGCCTCCGAATCCCGTGTCCTGCCTGAGGGAGGAGCCAGGTGGAGAGGTCCGTTTGCCATCGGAGGCATTAAAATCGATTGACAGTTTGATCAAATTTGACAAACCCAATTGCAAGCTGAAAGCAGACGAAATTTATTCATCGTTGGCAGCGCAAAATGCCAATGTCTCTGATCTGGAGGACAGAATAAGAGAGCATCTATCTGAAAATCATTGCAATTATTGTTCTCGTCCTCTTCCCGTTGTATACTATCAGTCTCAAAAAGAGGTTGATATTTTACTCTGCACTGATTGCTTTCATGATGGGAGATTTGTCGTTGGTCATTCAAGTATAGATTTTATGAGGGTCGATTCAACAAGGGATTATGGTGAACTAGATGGAGATAATTGGACTGATCAAGAAACTTTGCTGCTGCTTGAAGCAATGGAAATTTACAATGAAAATTGGAATGAAATTGCTGAGTATGTTGGTACCAAGTCAAAAGCACAGTGCATTCTTCATTTTCTCCGTCTACCCATGGAAGATGGGAAATTGGAAAATATCAATGTTCCAAGCATGTCTTCTTCATCCAGTGTGATGAATAGAGATGATAGTGGAAGACTGCATTGTTACTCAAACGGAGATACTGCAGGACCTTTCCATCAAATCAGAGATTCTAACAGCCGGCTTCCTTTTGCTAATTCTGGAAATCCTGTAATGGCTCTGGTTGCCTTTTTAGCCTCTGCTGTTGGACCAAGAGTAGCTGCTTCTTGTGCCCATGCAGCATTAGCAGTATTGTCAGAGGATAATTCTGGCAGCACATCTCAGATGGAAGCACCAGGACACGATAATAGGACAAATCCAGAAACCATACATTGTCGAGATGGTGGGCCTAGAGGAGAAACAGCAACATCGAACAATCATATTGAGGATAAGGCAAAAGTAATTGGTTCATGGGGTCAAAATGAGGGTAGGACAACCCCTCTTTCTGCTGAGAAAGTTGAAGATGCTGCTAAAGCAGGCCTCTCTGCTGCAGCAATGAAAGCTAAATTATTTGCTGATCATGAAGAACGAGAAATTCAGAGGTTATGTGCTAATATTGTTAATCATCAGTTGAAAAGATTGGAATTGAAGCTGAAACAGTTTGCAGAAATTGAAACATTGTTGATGAAAGAATGTGAACAAATGGAGAGAACAAAGCAGAGGTTTGCTGGTGAACGGTCCCGCATAATATCGGCACGTCTTGGAAATACAGGAGCCACACCCTCAATGAACGCATCTGGTGTTGGTCCTTCAATGGCTAGTAATGGCAACAATAGGCAACAAATGATCTCTGCTTCTTCCTCACAGCCCAGCATCTCGGGGTATGGCAACAACCAACCAGTTCATCCACATATGTCCTTTGCCCCACGACCTTCAATGTTTGGATTGGGACAAAGATTGCCCCTATCTATGATACAGCAGTCGCAATCAGCTTCTTCAAGTGCCATGTTCAATGCCCCTAGTAATGTGCAGTCCACTACCAATCATCCATTGTTGAGGCCTGTATCAGGAACTAACTCTGGTTTAGGTTAA 2502 0.4412 MPASPSGFLFLSKTLTLSLSLSFYNANQFARFLNFIFNLSLLFSISFFPFFAENRTRWRKRKRESQINRRHQKHDDDEEEEEENPNADEDRDYDSEEQTHHNPNNHTNSQQHPEIEVLSDHAVQISQFPLVIKRSVNRPHSSVTSIVALERALESGDNKAQLHNPPFLENVSHGQLQALSTVPSDSAAFDQDRSDSSYVITPPPILEGRGVVKRFGNKTLVVPMHSDWFSPATVHRLERQAVPHFFSGKSQDHTPEKYMECRNYIVALHMEDPGKRIMVSDCQGLVAGVDVEDLTRIVRFLDHWGIINYCVRIPSNEPPNPVSCLREEPGGEVRLPSEALKSIDSLIKFDKPNCKLKADEIYSSLAAQNANVSDLEDRIREHLSENHCNYCSRPLPVVYYQSQKEVDILLCTDCFHDGRFVVGHSSIDFMRVDSTRDYGELDGDNWTDQETLLLLEAMEIYNENWNEIAEYVGTKSKAQCILHFLRLPMEDGKLENINVPSMSSSSSVMNRDDSGRLHCYSNGDTAGPFHQIRDSNSRLPFANSGNPVMALVAFLASAVGPRVAASCAHAALAVLSEDNSGSTSQMEAPGHDNRTNPETIHCRDGGPRGETATSNNHIEDKAKVIGSWGQNEGRTTPLSAEKVEDAAKAGLSAAAMKAKLFADHEEREIQRLCANIVNHQLKRLELKLKQFAEIETLLMKECEQMERTKQRFAGERSRIISARLGNTGATPSMNASGVGPSMASNGNNRQQMISASSSQPSISGYGNNQPVHPHMSFAPRPSMFGLGQRLPLSMIQQSQSASSSAMFNAPSNVQSTTNHPLLRPVSGTNSGLG* 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0204 833 ProSiteProfiles SWIRM domain profile. 220 318 IPR007526 GO:0005515
Apr1g0204 833 CDD SANT 445 487 IPR001005 -
Apr1g0204 833 Gene3D - 226 313 IPR036388 -
Apr1g0204 833 MobiDBLite consensus disorder prediction 61 112 - -
Apr1g0204 833 Pfam Myb-like DNA-binding domain 445 487 IPR001005 -
Apr1g0204 833 Pfam SWIRM domain 223 309 IPR007526 GO:0005515
Apr1g0204 833 SUPERFAMILY Homeodomain-like 219 312 IPR009057 -
Apr1g0204 833 MobiDBLite consensus disorder prediction 795 833 - -
Apr1g0204 833 ProSiteProfiles SANT domain profile. 441 492 IPR017884 -
Apr1g0204 833 PANTHER SWI/SNF COMPLEX SUBUNIT SWI3C 105 832 - -
Apr1g0204 833 MobiDBLite consensus disorder prediction 578 592 - -
Apr1g0204 833 ProSiteProfiles Myb-like domain profile. 438 488 IPR001005 -
Apr1g0204 833 Coils Coil 365 385 - -
Apr1g0204 833 ProSiteProfiles Zinc finger ZZ-type profile. 383 437 IPR000433 GO:0008270
Apr1g0204 833 PANTHER SWI/SNF COMPLEX-RELATED 105 832 - -
Apr1g0204 833 MobiDBLite consensus disorder prediction 578 616 - -
Apr1g0204 833 Gene3D - 442 492 - -
Apr1g0204 833 SUPERFAMILY Homeodomain-like 443 496 IPR009057 -
Apr1g0204 833 Pfam SWIRM-associated region 1 649 723 IPR032451 -
Apr1g0204 833 SMART sant 442 490 IPR001005 -
Apr1g0204 833 Coils Coil 662 682 - -
Apr1g0204 833 MobiDBLite consensus disorder prediction 78 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0204 Apr-Chr1 2249302 2258700 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0204 388 484 EF-hand Containing Proteins AT3G07740 33.019 1.99e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0204 K11649 - gmx:100780440 1341.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0204 1 2249302 2258700 Apr1g0204 1 2249302 2258700 ECH