Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0203 ATGAACGCGTTGCATTGGAGGGCCATTCAAGTACCGGCGATGAAGAAGAGAAAAAGATCCCCAAAACAGGTGGCGCCACCTCCCTCGACGCCTCCATCGCCCCAAACCCAAACCCGCCACTCTCTCAACGCCACCAAATCATGGGCCTGGGCCCCTCTCAACCTGGCCCAGCAAGAACTCTCCCTGCCCCTCACCTTCCCCACGGGCCAAACCTTCCGTTGGAAAAACACCGCCCCTCTACAATACACCGGCGTCGTTGGGCCCCACCTTTTATCCCTCAAAAACCTCCAAAACGGCGACGTTTGCTACTGCCTTCACTCCCACTCCCACTCAGACGACGCCGTAACGGCCCTCCTTGATTTTCTAAACGCCAACGTTTCCCTCGCCGACACGTGGAAGGTTTTCTCCGCTTCCGATGCCAGGTTCGCCGAGCTCGCGCGCCACTTGGGTGGCGCCAGGGTGCTCCGGCAAGACCCTTTCGAGTGCCTTATTCAGTTTCTGTGTTCTTCCAATAACAACATTGCAAGGATCACCAAAATGGTCGATTACGTTTCGTCCTTGGGAACTTACGTTGGCCACGTTGGAGGCTATCAGTTCCACGCTTTCCCCAATTTGGAACAACTTTCATTGGTCTCTGAGCAACAACTCAGAAACGCTGGTTTTGGTTACAGGGCTAAATACATAATTGGCACGGTAAAGGCTTTGCAATCAAAACCTGGTGGAGGGGAAGAGTGGCTTCGGTCTCTTCGTAAATTGGATCTTGAAGATGTTATATCTGCACTTTCTACGTTACCTGGTGTGGGTCCTAAAGTGGCTGCTTGCATTGCTCTTTTCTCACTTGATCAACACCATGCCATTCCTGTTGACACTCACGTGTGGCAGATTGCCACCAAGTATCTCTTACCTGAGCTTGCAGGTTCCCAGTTGACACCGAAGCTCTGCAATCGTGTTGCAGAGGCATTTGTAGCCAAATATGGTAAATATGCCGGCTGGGCACAAACTCTATTATTTATAGCTGAATTACCTTCACAAAAGGCCCTTCTACCTTCACATTTGTGGACTATCAAACAGCACAATCCTGCGAAGATAGAAGATGGCGAAGAAGAATTTGAGTGA 1116 0.5099 MNALHWRAIQVPAMKKRKRSPKQVAPPPSTPPSPQTQTRHSLNATKSWAWAPLNLAQQELSLPLTFPTGQTFRWKNTAPLQYTGVVGPHLLSLKNLQNGDVCYCLHSHSHSDDAVTALLDFLNANVSLADTWKVFSASDARFAELARHLGGARVLRQDPFECLIQFLCSSNNNIARITKMVDYVSSLGTYVGHVGGYQFHAFPNLEQLSLVSEQQLRNAGFGYRAKYIIGTVKALQSKPGGGEEWLRSLRKLDLEDVISALSTLPGVGPKVAACIALFSLDQHHAIPVDTHVWQIATKYLLPELAGSQLTPKLCNRVAEAFVAKYGKYAGWAQTLLFIAELPSQKALLPSHLWTIKQHNPAKIEDGEEEFE* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0203 371 Gene3D - 132 341 IPR023170 -
Apr1g0203 371 SUPERFAMILY DNA-glycosylase 158 339 IPR011257 GO:0003824|GO:0006281
Apr1g0203 371 Gene3D - 36 121 - -
Apr1g0203 371 Pfam 8-oxoguanine DNA glycosylase, N-terminal domain 53 163 IPR012904 GO:0003684|GO:0006289|GO:0008534
Apr1g0203 371 Pfam HhH-GPD superfamily base excision DNA repair protein 164 299 IPR003265 GO:0006284
Apr1g0203 371 SUPERFAMILY TATA-box binding protein-like 40 157 - -
Apr1g0203 371 CDD ENDO3c 160 338 IPR003265 GO:0006284
Apr1g0203 371 Gene3D Hypothetical protein; domain 2 158 282 - -
Apr1g0203 371 PANTHER N-GLYCOSYLASE/DNA LYASE 49 354 - -
Apr1g0203 371 MobiDBLite consensus disorder prediction 10 40 - -
Apr1g0203 371 PANTHER 8-OXOGUANINE DNA GLYCOSYLASE 49 354 - -
Apr1g0203 371 SMART endo3end 168 341 IPR003265 GO:0006284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0203 K03660 - gmx:100789749 601.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0203 1 2237175 2242603 Apr1g0203 1 2237175 2242603 ECH