Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0192 ATGGATGGTTCATGTTTTCCTTCCATGAATTCTCACTCGAAAAATGCAGAGAGAAAGATAAATCATACCTCAAACAAGAGTGACGATTATCTGCCAACAACCCCTCGTTCATGGAACAGAAGTGGCAGTTTCAAAATCCCTCCACATCTTCAGACAAGAAATGGAAGCCTTAGGAGAAACACTACAATCATGTATTCTAATTCTTCTGGGATGCTAAAACCCCCACCAATTGAGAAAAAGCTGGAATGCACCCTCGAAGAGCTGTGCTATGGATGCAAGAAAAAGATCATGATCTCAAGGGATGTCCTCACAGACACAGGGGAAATAGTTCAAGAGGAGGAAATGCTAACAATAAATGTACAGCCAGGATGGACAAAAGGAACAAAGATAACATTTGAAGGAAAAGGGAATGAGAGACCTGGTGCATACACAGAAGATATAATATTTTTCATCTCAGAGAAAAGACACCGATTGTTTAGAAGGGAAGGGGATGATTTGCAATTGAGTTTAGAAATTCCTTTACTGAAGGCACTTACTGGGTGTACAATATTAGTGCCCCTGTTGTGTGAAGAGCAAATGAATTTGACATTGGAAAATATCATATACCCTGGCTTTGAGAAGATAATCCCTGGCCAAGGCATGCCAATTTCAAGAGAACCGGGGAAGAGAGGTAATTTGAGAATTCAATTTCTAGTTGAGTTTCCAACACAACTCACATGTAGTCAAAGATCACAGGTTGTTCGTATATTACAGGGTTGTTGTTGA 765 0.4 MDGSCFPSMNSHSKNAERKINHTSNKSDDYLPTTPRSWNRSGSFKIPPHLQTRNGSLRRNTTIMYSNSSGMLKPPPIEKKLECTLEELCYGCKKKIMISRDVLTDTGEIVQEEEMLTINVQPGWTKGTKITFEGKGNERPGAYTEDIIFFISEKRHRLFRREGDDLQLSLEIPLLKALTGCTILVPLLCEEQMNLTLENIIYPGFEKIIPGQGMPISREPGKRGNLRIQFLVEFPTQLTCSQRSQVVRILQGCC* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0192 254 SUPERFAMILY HSP40/DnaJ peptide-binding domain 76 156 IPR008971 GO:0006457|GO:0051082
Apr1g0192 254 Gene3D - 73 155 - -
Apr1g0192 254 MobiDBLite consensus disorder prediction 26 60 - -
Apr1g0192 254 PANTHER FAMILY B PROTEIN, PUTATIVE-RELATED 3 251 - -
Apr1g0192 254 Gene3D - 156 236 - -
Apr1g0192 254 SUPERFAMILY HSP40/DnaJ peptide-binding domain 159 244 IPR008971 GO:0006457|GO:0051082
Apr1g0192 254 MobiDBLite consensus disorder prediction 1 60 - -
Apr1g0192 254 Pfam DnaJ C terminal domain 77 235 IPR002939 -
Apr1g0192 254 CDD DnaJ_C 75 238 - -
Apr1g0192 254 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 3 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0192 Apr-Chr1 2107507 2108802 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0192 K09519 - gmx:100782604 388.652