Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0182 ATGGCTCAAACCATGGTTCTCATGTCTAGTGTCTCAAGTAGCTATTCTGTGGATTTGAAGAAATACCCTTTGCTCCAACTACAAAGCCAAAGATTAAGGCCTAAGTTTTCTCATGTCTCATTCAACCCACTGCCTTCAAATTCTTTGCCCTTTTCATCCCGTACATTTACAACTCTCGCTCTTTTCAAATCAAAGACCAAATCCGCTCCTCCTAAGACCAAGGTTACAAAGCCAAAGCCAAAGGTTGAAGATGGTGTCTTTGGCACTTCTGGAGGATTTGGTTTTACTAAGCAGAACGAGCTCTTCGTGGGTCGTGTTGCTATGCTCGGTTTTGCAGCATCATTGTTGGGTGAAGGTTTAACAGGCAAAGGAATTCTAGCACAATTGAATCTAGAAACTGGAATTCCTATCTATGAAGCAGAACCCCTTCTTCTCTTTTTCATCCTTTTCACCCTTTTAGGTGCCATTGGAGCTCTAGGTGACCGTGGTAAATTTGTTGACGATGACCCTCCTGCTGGAGCTGTTATTCCTCCAGGCAAAGGCGTTAGAGGAGCTCTTGGTCTCAGTGAAGGAGGTCCTTTATTTGGATTCACCAAAGCCAATGAGCTCTTCGTGGGAAGATTGGCTCAATTGGGTTTCGCTTTCTCTTTGATCGGAGAAATTATTACTGGGAAGGGAGCTTTAGCTCAGCTCAACATTGAAACCGGGGTACCAATTAATGAAATCGAACCGTTAGTGTTGTTCAATGTTCTTTTCTTCTTCATTGCTGCTTTGAATCCTGGAACTGGCAAATTCCTTACTGATGAGGAGGAAGATGATTAG 822 0.4331 MAQTMVLMSSVSSSYSVDLKKYPLLQLQSQRLRPKFSHVSFNPLPSNSLPFSSRTFTTLALFKSKTKSAPPKTKVTKPKPKVEDGVFGTSGGFGFTKQNELFVGRVAMLGFAASLLGEGLTGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDDDPPAGAVIPPGKGVRGALGLSEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLFNVLFFFIAALNPGTGKFLTDEEEDD* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0182 273 Pfam Chlorophyll A-B binding protein 91 214 IPR022796 -
Apr1g0182 273 SUPERFAMILY Chlorophyll a-b binding protein 79 251 - -
Apr1g0182 273 PANTHER PHOTOSYSTEM II SUBUNIT S 191 258 - -
Apr1g0182 273 PANTHER PHOTOSYSTEM II SUBUNIT S 1 184 - -
Apr1g0182 273 PANTHER UPF0041 BRAIN PROTEIN 44-RELATED 191 258 - -
Apr1g0182 273 PANTHER UPF0041 BRAIN PROTEIN 44-RELATED 1 184 - -
Apr1g0182 273 Gene3D Chlorophyll a/b binding protein domain 138 243 - -
Apr1g0182 273 Gene3D Chlorophyll a/b binding protein domain 19 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0182 Apr-Chr1 2041969 2043724 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0182 K03542 - gmx:100807355 406.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0182 1 2041969 2043724 Apr1g0182 1 2041969 2043724 ECH