Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0180 ATGAACCCCTACATTGTTGGCTTCGTGGTTCCTCTCCTCGTACTCCTCTTCCGCAATTCCAACAACCGCAAGCGCCGCGGCTTGCCCGCCGACGTCGGCGGTGAGCCCGGCTTTGCGGTTCGGAACCACCGGTTCGGTTCGGTTATGAGTTCGGCTTGGGATGGAGTGACGACTCTGGCGGAGCTGTTCGAGCGTGCATGCAGGGAGCATCATGATAGGTTGTTGCTCGGGACGCGCGAGTTGATCGCGCGTGATGTTGAGACCTCTCAGGATGGAAGAACCTTCGAGAAGCTTCATCTCGGAGATTACCACTGGCTCACCTATGGAAAAGTGTTTGAATCTGTGTGTAGTTTCGCTTCTGGTTTAGCATCGCTGGGTCATCCCAGGGAAGAGCGTGCAGCTATCTTTGCTGAGACCGGGGAACAATGGTTTATTGCATTGCAGGGTTGCTTCAGGAGAAATGTGACGGTTGTGACTATTTACGCGTCGTTGGGAGAGGAAGCTTTGTGTCACTCGTTGAATGAGACAGAGGTTACAACTGTGATTTGTGGGCGCAAAGAATTGGGATCACTAATACATATTAGTGGACAACTTGACTCAGTGAAACGTGTGATATGCACGGCTGTGGATGTCCCATCCGATGCTTCATCTGCTCAGCATGGCTGGACAATCACGTCCTTTGCTGACGTTGAGAGGCTTGGTAGAGAAAACCCTGTTGAGGCTGATTTACCCCTTTCAGCGGATGTTGCAGTTATAATGTACACGAGTGGAAGTACTGGATTGCCTAAGGGTGTGATGATGACACATGGCAATGTCTTGGCAACAGTCTCTGCTGTAATGACAATAGTTCCAAATCTTGGGCCGAAGGATGTCTACCTAGCATACTTGCCAATGGCTCATATCCTTGAATTAGTAGCTGAGAATTTGCTTGCAGCTGTTGGAGGTTGTATAGGATATGGAACTCCTTTGACTCTAACTGATTCATCAAACAAGATAAAAAAGGGAAAAAAAGGGGACGCCACAGCATTGATGCCAACTGTGATGGCAGCTGTACCAGCAATTCTTGATCGTGTACGTGATGGAGTGCTCAAGAAGGTAAATGCAAAGGGAGGATTATCAAAGAAATTGTTTGATTTAGGCTATGCTCGAAGGTTGAGTGCAATTAATGGTAGCTGGTTTGGTGCTTGGGGCTTGGAAAAAGCTCTATGGCATTTTCTTGTGTTCAAAAAGGTCCAAGCAATTCTGGGTGGTCGCATCCGATTTATACTGTCTGGCGGTGCTCCCCTTTCTAGTGATACCCAAAGATTCATCAATATTTGTCTTGGTGCTCCAATAGGTCAAGGATACGGTCTCACAGAGACTTGTGCTGGTGGGACATTCTCTGATTTTGATGATATATCTGTGGGTCGTGTTGGACCACCTCTTCCTTGCTCATATATTAAGCTAATTGATTGGCCTGAAGGTGGATATTCAACTAATGACTCACCGATGCCTCGTGGTGAAATTGTAGTTGGTGGTCCAAATGTCACTCTGGGGTACTTCAAAAATGAAGAAAAGACAAAAGAATCTTACAAGGTTGATGAAAGAGGAATGAGGTGGTTCTACACTGGTGATATAGGGAGATTTCATAAAGATGGTTGCCTTGAGATCATTGATCGGAAGAAGGACATAGTTAAACTACAGCATGGAGAATATGTGTCTTTGGGAAAGGTTGAGGCAGCTCTTCTTGTCAGTCCCTTCGTGGATAATATTATGTTGCATGCTGATCCTTTTCATAGCTACTGTGTGGCACTCGTGGCGGTTTCTCATCCCACATTGGAGCAATGGGCTTCAGAGCAAGGAATTTCTTATTCTGATCTTTCAGAACTGTGCGGGAAAGAAGAAAGTGTGAAGGAGGTCTATGCATCGCTTTCAAAGGAAGCAAAGAAGGCTCGTTTGGAAAAATTTGAGATTCCTGCAAAAATTAAGCTGCTTTCTGATCCATGGACTCCAGAATCTGGCTTAGTCACTGCAGCTCTTAAGATCAAGAGAGATGTCATTAGAAAGACTTTTCAAGAAGAGCTCTCAAAGTTATATGCCTCGTAG 2085 0.4604 MNPYIVGFVVPLLVLLFRNSNNRKRRGLPADVGGEPGFAVRNHRFGSVMSSAWDGVTTLAELFERACREHHDRLLLGTRELIARDVETSQDGRTFEKLHLGDYHWLTYGKVFESVCSFASGLASLGHPREERAAIFAETGEQWFIALQGCFRRNVTVVTIYASLGEEALCHSLNETEVTTVICGRKELGSLIHISGQLDSVKRVICTAVDVPSDASSAQHGWTITSFADVERLGRENPVEADLPLSADVAVIMYTSGSTGLPKGVMMTHGNVLATVSAVMTIVPNLGPKDVYLAYLPMAHILELVAENLLAAVGGCIGYGTPLTLTDSSNKIKKGKKGDATALMPTVMAAVPAILDRVRDGVLKKVNAKGGLSKKLFDLGYARRLSAINGSWFGAWGLEKALWHFLVFKKVQAILGGRIRFILSGGAPLSSDTQRFINICLGAPIGQGYGLTETCAGGTFSDFDDISVGRVGPPLPCSYIKLIDWPEGGYSTNDSPMPRGEIVVGGPNVTLGYFKNEEKTKESYKVDERGMRWFYTGDIGRFHKDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALLVSPFVDNIMLHADPFHSYCVALVAVSHPTLEQWASEQGISYSDLSELCGKEESVKEVYASLSKEAKKARLEKFEIPAKIKLLSDPWTPESGLVTAALKIKRDVIRKTFQEELSKLYAS* 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0180 694 ProSitePatterns Putative AMP-binding domain signature. 252 263 IPR020845 -
Apr1g0180 694 Pfam AMP-binding enzyme 97 561 IPR000873 -
Apr1g0180 694 Gene3D - 49 553 IPR042099 -
Apr1g0180 694 SUPERFAMILY Acetyl-CoA synthetase-like 55 692 - -
Apr1g0180 694 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 10 693 - -
Apr1g0180 694 PANTHER BACTERIAL LONG-CHAIN FATTY ACID COA SYNTHETASE 10 693 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0180 Apr-Chr1 2020299 2026933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0180 147 693 Acyl Lipid Metabolism Gene Families AT1G77590 78.245 0.0 908
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0180 K01897 - gmx:100778889 1221.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0180 1 2020299 2026933 Apr1g0180 1 2020299 2026933 ECH