Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0179 ATGGAAGACACCTTCGTTTTCCAGTGGAGCGCCGTTAGATCTCTCTTATCCATCCTTCAGTGGTGGGCCTTTAACGTCACCGTTATCATCGTTAACAAGTGGATCTTCCAGAAATTGGATTTCAAGTTTCCTCTATCAGTATCATGTGTCCACTTTATCTGCTCAGCCATTGGAGGATATGTGGTAATTAAGGTGTTGAAGCTCAAACCACTGATAACTGTTGACCCTGAAGATCGCTGGAGAAGAATCTTTCCAATGTCATTTGTTTTCTGTATTAACATAGTTCTGGGAAATGTGAGCCTAAGATACATTCCAGTTTCCTTTATGCAGACAATAAAGTCATTCACACCTGCCACCACCGTTGTTTTGCAATGGCTAGTATGGAGGAAATACTTTGAATGGCGTATTTGGGCTTCTCTTATACCCATTGTTGGAGGGATTCTTCTCACATCTGTAACAGAGCTTAGTTTTAATATGTTTGGATTTTGTGCTGCCTTATTTGGTTGTTTGGCTACATCCACAAAGACTATTCTTGCAGAATCTCTTCTGCATGGATACAAATTTGACAGCATAAACACAGTTTATTACATGGCACCTTTTGCAACAATGATCTTGGCGCTTCCTGCCATGTTACTTGAAGGTGATGGAATTCTTGAATGGCTAAATACCCATCCATATCCTTGGTCGGCTCTCATAATTATTTTTAGCTCTGGGGTGTTGGCTTTCTGTCTTAACTTCTCCATTTTTTACGTGATTCACTCCACCACTGCTGTAACGTTTAACGTTGCCGGAAATATGAAGGTTGCAGTTGCTGTCCTTGTTTCTTGGCTGATATTTAGGAACCCAATTTCATATTTAAATGCTGTTGGGTGTGCCGTGACTCTCGTGGGATGTACATTCTATGGTTATGTCAGGCACATGCTTTCTCAACAGCCACCAGTCCCAGGAACTCCTCGGACACCCAGGACCCCTCGGAGTAAGATGGAGTTGCTTCCTCTTGTAAATGATAAATTAGAAGATAAGGTCTAA 1029 0.4169 MEDTFVFQWSAVRSLLSILQWWAFNVTVIIVNKWIFQKLDFKFPLSVSCVHFICSAIGGYVVIKVLKLKPLITVDPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFEWRIWASLIPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHGYKFDSINTVYYMAPFATMILALPAMLLEGDGILEWLNTHPYPWSALIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNMKVAVAVLVSWLIFRNPISYLNAVGCAVTLVGCTFYGYVRHMLSQQPPVPGTPRTPRTPRSKMELLPLVNDKLEDKV* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0179 342 SUPERFAMILY Multidrug resistance efflux transporter EmrE 68 152 - -
Apr1g0179 342 PANTHER SOLUTE CARRIER FAMILY 35 4 327 - -
Apr1g0179 342 PANTHER GDP-MANNOSE TRANSPORTER GONST5 4 327 - -
Apr1g0179 342 Pfam Triose-phosphate Transporter family 15 301 IPR004853 -
Apr1g0179 342 SUPERFAMILY Multidrug resistance efflux transporter EmrE 220 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0179 Apr-Chr1 2009814 2013984 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0179 8 342 Organic Solute Cotransporters AT1G77610 90.179 0.0 617
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0179 K15285 - gmx:100809511 658.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0179 1 2009814 2013984 Apr1g0179 1 2009814 2013984 ECH