Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0168 ATGGCGAAGGACATGAACTTAAGCTCTGGAACCCCAATCCCTCTGCTCTTGTTGCTATGCTTCACTACTTTTATGCTCCTTCGCACTGAAGCCGTATGGTTAACCATCCCCAGTAAGGGAACCAAGTGCATGTCCGAGGAAATCCAGTCACACGTTGTCGTTTTAGCCGATTACTATGTTGTAGCCGATGATGTCAAGGGTCACCACCTTCAAACTATTTCTGCCAAGGTGACATCTCCTTATGGAAATACTCTTCACCACAATGAAAATGTTACCCATGGTCAGTTTGCATTTACAACTACCGAGAGTGGGAACTATGTGGCATGCTTTTGGGTGGATAGTAAACATCAAGAAGGTGCAGGGGACACCACAATCAGCCTTGAATGGAAAACTGGAATCTCTGCCAAAGATTGGGACTCCGTTGCAAGAAAAGAAAAGATAGAGGGCGTTGAACTTGAGCTAAGGAAACTTGAAGGAGCAGTGGAAGCCATCCGGGATAATCTAATTTATTTGAAGAATAGGGAAGCTGAGATGAGGGAAGTTAGTGAAGCAACAAATGCTCGAGTCGCTTGGTTTAGTATCTTTTCTCTTGGCCTTTGCATTTTGGTTTCTATATTGCAGCTGTTACATCTGAAGCGCTTCTTTCGGAAGAAGAAGCTCATATAG 666 0.4414 MAKDMNLSSGTPIPLLLLLCFTTFMLLRTEAVWLTIPSKGTKCMSEEIQSHVVVLADYYVVADDVKGHHLQTISAKVTSPYGNTLHHNENVTHGQFAFTTTESGNYVACFWVDSKHQEGAGDTTISLEWKTGISAKDWDSVARKEKIEGVELELRKLEGAVEAIRDNLIYLKNREAEMREVSEATNARVAWFSIFSLGLCILVSILQLLHLKRFFRKKKLI* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0168 221 Coils Coil 147 174 - -
Apr1g0168 221 PANTHER EMP24/GP25L/P24 FAMILY PROTEIN 11 221 - -
Apr1g0168 221 ProSiteProfiles GOLD domain profile. 41 156 IPR009038 -
Apr1g0168 221 SMART EMP24_GP25L_2 31 216 IPR009038 -
Apr1g0168 221 Pfam emp24/gp25L/p24 family/GOLD 33 216 IPR009038 -
Apr1g0168 221 PANTHER TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 11 221 IPR015720 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0168 Apr-Chr1 1853601 1855791 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0168 K20352 - gmx:100500676 352.443
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0168 1 1853601 1855791 Apr1g0168 1 1853601 1855791 ECH