Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0163 ATGGAGCATCCGAAGAGCCAGAGCAAGCTAACCAGAACCCACTCCTCGCTCCTCAGTTCTTCCCCCACAATTCGATCATCCATTCACAGCCTCTCATCCATGAACAAAGACGAACTCCTCCTCGATTATGACGACAAGAACAAGAAAAACAACAAGAAACCCCAAACCCCTCGAACCGGTTCGAGCCGGGTAACCACTCCGGTTCTGGCGGTTGCTTCGCTCGGTTTTCTGTGCGCCTCCTCCTTCTCCATTTACCTCATCTACTTCTTCTACCTCGAGGTTCCCACCTCGGAAAACGTGTTGCTGGCGCTGATTTTCATCGCGGTGGCACTCTACTTCGCGTCCAAGAACAAGGGTCTCATCCACCGGTCGCTTTCGGTGGTGAAGCATTCGTGGGAGGAGCACGTGAAGCGGTTGGGGTTTTCGAAGGCGCAGGCGAAGCCGGTTCAGTGGTTTATCGGTGACTCAGGGGGAACAACGAAGGTGAAGAAGGAGAAGATAGTAAGGGAAGGTGTGGAGTTTTACAGCAATGGGGATTTCTACGAGGGGGAGTTTCATAAGGGGAGGAGTAATGGTAGTGGGGTTTACAATTACTTTGTGAATGGGAGGTATGAGGGTGATTGGGTTGATGGAAGGTATGATGGGTATGGGATTGAGAGCTGGGCCAGAGGGAGTCGCTATAGGGGTCAGTATAGGCAAGGATTGAGGCATGGTTATGGGGTTTACAGGTTCTACACCGGTGATTCTTATGCTGGAGAATGGTGTAATGGTCAGAGTCATGGTATGGGACTTCAGACTTGCTCCGATGCTAGCTGTTATATTGGTCAGTTTAAGTATGCTGTCAAGCACGGACTTGGTTGTTACCATTTTAGAAATGGAGATAGATATGCTGGAGAGTATTTTGGAGACAAAATACATGGATTTGGGGTTTACCACTTTGCCAATGGACACTGCTACGAGGGAGCATGGCATGAGGGTCGTAGGCAAGGTATTGGCTCATATACTTTCCGAAACGGCGACAGAAGGTGTGGTGAATGGGATGCTGGCAACCTCAAGCATCCTCTACCACCACAATCTGATGCTGTCCTCAGAGCAGTTCAGGCTGCCAGGAAAACAGCAGAGAATGCTATAAACCTTAGGCGGGTTGATGATCAGGTTAACAAAGCAGTAATCGCTGCTAACAAGGCTGCAACTGCTGCTAGAGTTGCTGCTGTGAAAGCTGTTCAGAACAGGATGGATGGAAAATTTTGCGATACTGATGTCTAA 1266 0.4937 MEHPKSQSKLTRTHSSLLSSSPTIRSSIHSLSSMNKDELLLDYDDKNKKNNKKPQTPRTGSSRVTTPVLAVASLGFLCASSFSIYLIYFFYLEVPTSENVLLALIFIAVALYFASKNKGLIHRSLSVVKHSWEEHVKRLGFSKAQAKPVQWFIGDSGGTTKVKKEKIVREGVEFYSNGDFYEGEFHKGRSNGSGVYNYFVNGRYEGDWVDGRYDGYGIESWARGSRYRGQYRQGLRHGYGVYRFYTGDSYAGEWCNGQSHGMGLQTCSDASCYIGQFKYAVKHGLGCYHFRNGDRYAGEYFGDKIHGFGVYHFANGHCYEGAWHEGRRQGIGSYTFRNGDRRCGEWDAGNLKHPLPPQSDAVLRAVQAARKTAENAINLRRVDDQVNKAVIAANKAATAARVAAVKAVQNRMDGKFCDTDV* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0163 421 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 16 414 - -
Apr1g0163 421 MobiDBLite consensus disorder prediction 10 31 - -
Apr1g0163 421 MobiDBLite consensus disorder prediction 1 31 - -
Apr1g0163 421 Gene3D - 256 301 - -
Apr1g0163 421 Gene3D - 302 361 - -
Apr1g0163 421 Gene3D - 211 255 - -
Apr1g0163 421 Gene3D - 162 210 - -
Apr1g0163 421 SMART morn 225 246 IPR003409 -
Apr1g0163 421 SMART morn 248 269 IPR003409 -
Apr1g0163 421 SMART morn 317 338 IPR003409 -
Apr1g0163 421 SMART morn 271 292 IPR003409 -
Apr1g0163 421 SMART morn 294 315 IPR003409 -
Apr1g0163 421 SMART morn 202 223 IPR003409 -
Apr1g0163 421 SMART morn 179 201 IPR003409 -
Apr1g0163 421 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 224 349 - -
Apr1g0163 421 PANTHER RADIAL SPOKE HEAD 10 HOMOLOG B-LIKE 16 414 - -
Apr1g0163 421 Pfam MORN repeat 181 198 IPR003409 -
Apr1g0163 421 Pfam MORN repeat 296 317 IPR003409 -
Apr1g0163 421 Pfam MORN repeat 273 295 IPR003409 -
Apr1g0163 421 Pfam MORN repeat 319 341 IPR003409 -
Apr1g0163 421 Pfam MORN repeat 250 269 IPR003409 -
Apr1g0163 421 Pfam MORN repeat 204 226 IPR003409 -
Apr1g0163 421 Pfam MORN repeat 227 248 IPR003409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0163 Apr-Chr1 1817233 1819475 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0163 144 351 Acyl Lipid Metabolism Gene Families AT1G21980 33.654 5.37e-29 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0163 - - gmx:100818442 614.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0163 1 1817233 1819475 Apr1g0163 1 1817233 1819475 ECH