Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0162 ATGCAGGTGCAGTGTACCTGCACCCATTCACTCATGAGATTCACGCCTTCTTCAAAATTTTTAAGCTTTTCAAATCACTTCAACAACGTTTTCAATATTGCTTCTTCTTCCCCTCCAACCCCCAAGTTCCCATCTTTCATTGCCGCCGCCATGTCCTCTGTTTCCACTCCCAATGAAACCGCCACTCATAATACCCATCGTCCTTTGCAGATTGCAAAGCGCTTAGAGAAGTTTCAGACAACAATCTTCACCCAAATGAGCTTGCTTGCCATCAAACATGGAGCCATAAACCTTGGTCAAGGCTTTCCCAACTTTGATGGTCCAGAATTTGTAAAGGAAGCAGCAATTCAGGCAATCAGGGATGGGAAAAATCAGTATGCACGGGGTTATGGAGTTCCAGATCTGAACATTGCCATTGCTGAGAGATTTAAGAAAGATACTGAACTAGTGGTAGATCCTGAAAAAGAAGTTACTGTTACTTCTGGATGCACAGAAGCAATTGCTGCAACTATATTAGGACTGATAAATCCTGGTGATGAGGTTATCATGTTTGCTCCTTTTTATGATTCTTATGAAGCCACTTTATCCATGGCTGGTGCAAAAGTCAAAAGCATCCCTCTGCGCCCTCCAGATTTTGCTGTCCCTATTGAAGAGTTGAAGTCCACAATCTCGAAGAATACCCGGGCCATTCTCATAAATACGCCTCACAACCCTACTGGAAAGATGTTTACTCGAGAGGAACTCAATTCCATTGCATCTCTTTGCATTGAGAATGATGTTCTGGTTTTCAGTGATGAAGTTTACGATAAGTTGGCATTTGATATGGATCACATTTCTATAGCTTCTTTGCCTGGGATGTTTGAAAGGACAGTGACGATGAACTCCTTGGGGAAGACATTCTCCTTAACAGGATGGAAGATTGGGTGGGCCATAGCACCCCCACAATTAACATGGGGAGTGCGACAGGCACACGCTTTCCTCACTTTTGCAACCTGCAATCCTATGCAGTGTGCTGCTGCTGTAGCTCTAAGAGCACCAGACTCTTACTATGCGGAGCTAAAGAGGGATTATATGGCAAAAAGAGCTATTTTGGTCGAAGGATTGAAGGCTGTTGGCTTCAAGGTATTCCCATCCAATGGAACCTACTTTGTGGTTGTAGATCACACCCCTTTTGGACTGGAAAATGATGTTGCATTTTGCGAATATCTAGTTAAGGAAGTCGGAGTGGTGGCAATCCCTACAAGTGTATTTTACTTGAATCCAGAAGATGGAAAGAATCTTGTCAGATTTACTTTCTGCAAGGATGAAGAAACTATTAGGTCTGCTGTTGAGAGGATGAAAAAGAAGCTTAGAAAATGA 1359 0.4297 MQVQCTCTHSLMRFTPSSKFLSFSNHFNNVFNIASSSPPTPKFPSFIAAAMSSVSTPNETATHNTHRPLQIAKRLEKFQTTIFTQMSLLAIKHGAINLGQGFPNFDGPEFVKEAAIQAIRDGKNQYARGYGVPDLNIAIAERFKKDTELVVDPEKEVTVTSGCTEAIAATILGLINPGDEVIMFAPFYDSYEATLSMAGAKVKSIPLRPPDFAVPIEELKSTISKNTRAILINTPHNPTGKMFTREELNSIASLCIENDVLVFSDEVYDKLAFDMDHISIASLPGMFERTVTMNSLGKTFSLTGWKIGWAIAPPQLTWGVRQAHAFLTFATCNPMQCAAAVALRAPDSYYAELKRDYMAKRAILVEGLKAVGFKVFPSNGTYFVVVDHTPFGLENDVAFCEYLVKEVGVVAIPTSVFYLNPEDGKNLVRFTFCKDEETIRSAVERMKKKLRK* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0162 452 Gene3D - 108 346 IPR015421 GO:0003824
Apr1g0162 452 PANTHER FI04487P 72 452 - -
Apr1g0162 452 Pfam Aminotransferase class I and II 96 445 IPR004839 GO:0009058|GO:0030170
Apr1g0162 452 SUPERFAMILY PLP-dependent transferases 70 451 IPR015424 -
Apr1g0162 452 CDD AAT_like 96 448 - -
Apr1g0162 452 PANTHER FI04487P 72 452 - -
Apr1g0162 452 Gene3D Aspartate Aminotransferase, domain 1 85 446 IPR015422 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0162 Apr-Chr1 1805661 1808170 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0162 K23977 - gmx:100818968 793.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0162 1 1805661 1808170 Apr1g0162 1 1805661 1808170 ECH