Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0159 ATGGAATCAGAAAGAATACAAACCTTGGCTTTAAACAAGCTCAAGGAGTTACCACCCCAGTTCATTCGCCCAGCCAATGAACAGCCAAAGAATAGCAAGGCCATGGAGGGTGTCACTGTGCCTATCATCTCACTGTCTCAACCACACCATCTTTTGGTGAAGCATGTCACGGAAGCAGCCTCCGAGTGGGGATTCTTTCTCATCACCGACCATGGTATATCCACAACACTAATCCAACGTTTGCAAGAAGTGGGTCAAGAGTTCTTTGCCCTCCCTCAGAAGCAGAAGGAAGAATATGCAAATAACCCTTCCACGGGTAGCTTTGAGGGCTATGGGACCAAGATGACCAAGAACCTTCAAGAAAAGGTGGAGTGGGTCGACTATTATTTTCATCTAATGTCTCCTCCTTCTAAGGTCAACTATGACATGTGGCCCAAAAACCCTCCTTCCTACAGGGAGGTAACACGAGAATACAATAAGGAGATCTCGAGGGTAACTGACAAGGTTTTGGAGCTTTTGTCTGAAGGGCTCGGGTTGGAGAGGAAGGTTTTGAAATCCTGCTTGGGAGATGAAGAAATAGAAATAGAAATGAAGATAAATATGTATCCACCATGCCCACAACCAGAACTGGCATTGGGTGTTGAGCCTCACACTGACATGTCTGCCCTTACCTTACTTGTCTCAAATGATGTTCCAGGCCTCCAAGTTTGGAAGGACGATAACTGGATTGCAGTAAATTACTTTGCAAATGCACTTTTTGTACACATTGGTGATCAACTTGAGGTGATAAGCAATGGAAAGTACAAGAGTGTTCTACACCGAAGTTTGGTGAACAAGGAGAGCAAGCGCATGTCATGGGCATTATTTGTCGTGCCTCCACATAAGGCGATGATTGGACCACTTCCCTCGATCGTCAATCATCAAAATCCACCTAAATTTTCAACAAAAACCTATGCTGAGTATCGCTATCGAAAATTCAATAAGCTTCCCCAATAG 996 0.4458 MESERIQTLALNKLKELPPQFIRPANEQPKNSKAMEGVTVPIISLSQPHHLLVKHVTEAASEWGFFLITDHGISTTLIQRLQEVGQEFFALPQKQKEEYANNPSTGSFEGYGTKMTKNLQEKVEWVDYYFHLMSPPSKVNYDMWPKNPPSYREVTREYNKEISRVTDKVLELLSEGLGLERKVLKSCLGDEEIEIEMKINMYPPCPQPELALGVEPHTDMSALTLLVSNDVPGLQVWKDDNWIAVNYFANALFVHIGDQLEVISNGKYKSVLHRSLVNKESKRMSWALFVVPPHKAMIGPLPSIVNHQNPPKFSTKTYAEYRYRKFNKLPQ* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0159 331 SUPERFAMILY Clavaminate synthase-like 4 328 - -
Apr1g0159 331 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 193 292 IPR005123 -
Apr1g0159 331 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 3 331 - -
Apr1g0159 331 Pfam 2OG-Fe(II) oxygenase superfamily 197 290 IPR044861 -
Apr1g0159 331 PANTHER FLAVONOL SYNTHASE/FLAVANONE 3-HYDROXYLASE-LIKE 3 331 - -
Apr1g0159 331 Pfam non-haem dioxygenase in morphine synthesis N-terminal 40 146 IPR026992 -
Apr1g0159 331 Gene3D - 2 329 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0159 Apr-Chr1 1770977 1772603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0159 4 328 Glycosyltransferase AT5G59530 29.882 3.11e-48 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0159 K05278 - gmx:100810937 570.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0159 1 1770977 1772603 Apr1g0159 1 1770977 1772603 ECH