Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0153 ATGGCGGGTGGTGGAAAGGTGTCGTTCAAAGTGACACTCACCTCCGATCCGAAGTTACCCTTCAAAGTATTTAGCGTTCCAGAGGCTGCACCTTTTACGGCCGTTCTCAAATTCGCCGCCGAAGAATTCAAAGTCCCTCCGCAAACCAGCGCTATTATCACCAACGGTAATGTCTTCCTTAAGCATGGTTCAGAATTGCGCCTGATTCCGCGTGATAGGGTTGGTGCTTCTTAG 234 0.5 MAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNGNVFLKHGSELRLIPRDRVGAS* 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0153 77 Gene3D - 4 76 - -
Apr1g0153 77 SUPERFAMILY Ubiquitin-like 2 75 IPR029071 -
Apr1g0153 77 Pfam Ubiquitin fold modifier 1 protein 6 69 IPR005375 GO:0071569
Apr1g0153 77 PANTHER UBIQUITIN-FOLD MODIFIER 1 3 77 - -
Apr1g0153 77 PANTHER UBIQUITIN-FOLD MODIFIER 1 3 77 IPR005375 GO:0071569
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0153 Apr-Chr1 1716824 1719311 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0153 K12162 - zju:107421011 145.591
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0153 1 1716824 1719311 Apr1g0153 1 1716824 1719311 ECH