Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0142 ATGGCTAAAGATGGTAAGGTGCGGTGCAAGTCCCGGTGTCAAGGTCACACGACAACCCCATGTCTTTTAACTTGTGCAAGAAAAAATCTGAAAGATGTTAATGTAAAGAAGAGGTTTTCTAAAGCATCAGAAAAGAAAGATTGGGAAGATGCAACCTGCTCAGTGTGCATGGAGGTCCCTCATAATGCTATCCTTCTCCTTTGTTCATCCTATGACAAGGGTTGTCGCCCTTACATGTGTGCTACTAGTCATCGCTATTCAAACTGTTTTGAACAGTACAAAAAGGCATACACAAAAGCAACTTCTGTTCAAAGTTTTCGGCTTGAAACAGACAATTCAAATTTTGATTTAAGCACAGGTGACCCTAATGACAATACAGAAGTTCCTGAGCTTCTTTGCCCCCTTTGTCGCCGGCAGGTGAAAGGTTGGACAGTAGTTGAAGCAGCACGGAAGTCTTTGAATGCCAAGAAAAGAAGCTGCATGCAAGATGATTGCTCCTTTGTAGGGAATTACAAGGAACTTAGGAAGCATGTCAGGTCTAAGCATCCATTCTCACGACCACGAGAGGTGGACCCAATAAGAGAAGAAAAATGGAAGAGACTTGAGTGTGAAAGAGAACGGAATGATGTGATTAGCACAATTTTATCTTCGACACCAGGGGCTATGGTACTTGGGGATTACGTACTGGAGCCAAATGAACATACCTTTTATAGTGACGAATATGATTCTGATGAGGAATATCTGGAGGATGATTTCTTCTCAGTGAGGTCCTTCGGTTTGGGGAGAACTGGCCATTTTTTGTCACACATTAGGTATAATCAGGACCGTGCTGCTGATTCTTTTGCCATTGATCGTTTTGGTTTGCAGAGTGTTGCACCTACAGGTTCTGCTGCTGTCTCTGGACGTGGACTGCACAGGCTACTGTTAGGAAGGTCTAGAAGACGACGGAGGCATAGGATAGCAAATGCAAGAAGGTTTAGGAGATCCAGGTCATTATGA 999 0.4354 MAKDGKVRCKSRCQGHTTTPCLLTCARKNLKDVNVKKRFSKASEKKDWEDATCSVCMEVPHNAILLLCSSYDKGCRPYMCATSHRYSNCFEQYKKAYTKATSVQSFRLETDNSNFDLSTGDPNDNTEVPELLCPLCRRQVKGWTVVEAARKSLNAKKRSCMQDDCSFVGNYKELRKHVRSKHPFSRPREVDPIREEKWKRLECERERNDVISTILSSTPGAMVLGDYVLEPNEHTFYSDEYDSDEEYLEDDFFSVRSFGLGRTGHFLSHIRYNQDRAADSFAIDRFGLQSVAPTGSAAVSGRGLHRLLLGRSRRRRRHRIANARRFRRSRSL* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0142 332 PANTHER OS01G0612600 PROTEIN 1 319 - -
Apr1g0142 332 Pfam Protein of unknown function (DUF1644) 49 212 IPR012866 -
Apr1g0142 332 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 32 186 IPR013083 -
Apr1g0142 332 PANTHER BNAC03G28140D PROTEIN 1 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0142 Apr-Chr1 1591134 1595167 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0142 - - gsj:114410461 522.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0142 1 1591134 1595167 Apr1g0142 1 1591134 1595167 ECH