Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0135 ATGAAAACTCGTAGCTCTACCAAAATCTCTGCATCATGGATTCCTATTTTCTCTGTCTTTTCCTTCATTCTTGGTATGCTCATCACAAGCAGGTTATTATCTATCTCTTCTGAATCAAACGGTTTGCTTATTGCTCAGCATCAGCGTGAACAAGAACTTCAAGTGATTTCAGGGGACTGTGCTAGCAAAAAGATGCAACCTAAGGATGCAATGAACGAATTGTACAAAACCCATGAAGCCATTCAAACTTTAGACAAGCAAGTGTCGATGCTTCAGATGGAATTAGCTGCAGCTAGGAGTTCTCGTGAAACTGGGATCTCGGATTCAAACACCACTTCGGGGATCTCTGAGGAAGGATCTACTCCAAGGAAGAAGGCATTTATAGTGATAGGCATAAACACTGCTTTCAGTAGCAGGAAGAGGCGTGATTCAGTTAGAGAGACTTGGATGCCTCAAGGTGAACAGCTTCTTCAATTAGAGCGTGAGAAGGGAATTGTTATCCGGTTCATGATTGGCCACAGTGCAACTTCCAACAGCATTCTAGATCGAGCTATTGATTCAGAAGAAGCCCAACACAAAGACTTCCTTCGCCTGGAGCATGTTGAAGGGTATCATGAGCTGTCTGCAAAGACAAAGATTTTCTTTTCGACTGCAGTTGCAATGTGGGATGCCGATTTTTATGTCAAGGTGGATGATGATGTCCATGTCAATTTAGGTGTCCTGGCATCAACCCTTGCTCGTCATCGATCAAAACCAAGGGTCTACATTGGGTGTATGAAATCTGGACCTGTTCTTTCTCGAAAGGATGTCAAGTACCATGAACCTGAGTTTTGGAAGTTTGGAGAAGAGGGGAACAAATACTTCCGACATGCCACTGGACAGATATATGCAATCTCCAAGGATCTAGCCACTTACATATCCATCAACCAGCCAATTTTGCATAAATATGCTAATGAAGATGTCTCACTTGGTGCATGGTTCATTGGTCTTGAAGTTGAGCATATAGATGACCGCAATATGTGCTGTGGAACTCCTCCAGATTGTGAGTGGAAGGCACAAGCAGGTAACATATGTGTTGCATCATTTGATTGGAGCTGCAGTGGAATCTGCAAGTCAGTGGAGAAGATTAAATATGTACACTCAAAGTGTGGTGAAGGGGATGGAGCTGTTTGGAGTGCTTTATTTTAG 1188 0.4301 MKTRSSTKISASWIPIFSVFSFILGMLITSRLLSISSESNGLLIAQHQREQELQVISGDCASKKMQPKDAMNELYKTHEAIQTLDKQVSMLQMELAAARSSRETGISDSNTTSGISEEGSTPRKKAFIVIGINTAFSSRKRRDSVRETWMPQGEQLLQLEREKGIVIRFMIGHSATSNSILDRAIDSEEAQHKDFLRLEHVEGYHELSAKTKIFFSTAVAMWDADFYVKVDDDVHVNLGVLASTLARHRSKPRVYIGCMKSGPVLSRKDVKYHEPEFWKFGEEGNKYFRHATGQIYAISKDLATYISINQPILHKYANEDVSLGAWFIGLEVEHIDDRNMCCGTPPDCEWKAQAGNICVASFDWSCSGICKSVEKIKYVHSKCGEGDGAVWSALF* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0135 395 MobiDBLite consensus disorder prediction 102 119 - -
Apr1g0135 395 Pfam Galactosyltransferase 140 337 IPR002659 GO:0006486|GO:0016020|GO:0016758
Apr1g0135 395 Gene3D - 116 341 - -
Apr1g0135 395 MobiDBLite consensus disorder prediction 100 119 - -
Apr1g0135 395 PANTHER HEXOSYLTRANSFERASE 8 387 - -
Apr1g0135 395 Pfam Domain of unknown function (DUF4094) 10 101 IPR025298 -
Apr1g0135 395 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 8 387 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0135 Apr-Chr1 1520900 1525624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0135 1 395 Glycosyltransferase AT1G77810 72.613 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0135 K20855 - gmx:100776715 735.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0135 1 1520900 1525624 Apr1g0135 1 1520900 1525624 ECH