Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0130 ATGGCGGAAAGTTTTGAATTGATAGACATGAAGCTCTCTCCGGCGAAATCGGTAGTGGATTACCCCCAAGACCAGAGGATTCCGTTGATGAAATCTCGACGGCGTCGGCGAGGCGACACGTGGGTGGTGTCTGTGTTCGTAATAATCCACATTGGTGTTTTCATAGCGACGATGCTCGTCAACGACTGCTGGAGTAATTCTCACGGCGATTGCGTTCTCCAACCCCTCGGAAGGTTCTCGTTTCAGCCTCTCCCCGAGAATCCCCTCTTAGGTCCTTCTCAGTCCAAGTTAGATGAAATGGGAGCTCTTCGAAGGAGCTTATTGACAGAAAATCATCAAACTTGGCGTCTTTTCACATTTCCGTTTTTGCACGCTGGACTGCTCCACCTAGTCATCAATCTCTGCAGTGTGATCTATGTGGGAGTTCACTTAGAGCAGGAGTTTGGACCTTTAAGGATTGGTATAATCTATACACTCTCTGCTTTTGTGGGTGCCTTGGTGGCCTCTCTTTTTCTCCAAAACACCCCGGCTGTTGGTTCTTCAGGTGCTTTATTTGGATTGCTGGGAACATTGCTTTCCGAACTTGTTTGGAACTGGAAATTTCATTCCAATAAGATTTCAGCAATAGCATCATTAGTCTCTGTCTTTGTGTGCAATTTTGTGCTTGGTTTTCTGCCTTATGTAGACAATTTTTCAAGCATTGGAGGTTTTATATCTGGATTCCTTATTGGATCTGTTTTTTTACTCAACCCTCATCAACAAGTAGCTCCAAATAAAGGAGGTCTCATTGATTATAGTATCAAAAGTTACATCAAGTTAAAGTTGAAGGAAATGCTGCACAGACCACTTCTCCAGATTGCTTCTCTTAACCTCTTCAACCTATTATTGGTTGGTTGTCTTGTGGCAGTTCTTTATGGAATCAACATCAACAGTTATTGCACATGGTGTCCATATGTTGACTGTATCCCTTTTACAAGCTGGCACTGCAAAGACATAGAAACCTCTTGTGAGACAATGGTGAGCAACGCTCAGCTGACAATGACCTGTATTGGGAATGGCAATTACCGGGTCTTTCCTTTTACCAACATCTCTCGGGCAAGGATTAATGATTTGTGCAATCTGATATGCTGA 1131 0.4359 MAESFELIDMKLSPAKSVVDYPQDQRIPLMKSRRRRRGDTWVVSVFVIIHIGVFIATMLVNDCWSNSHGDCVLQPLGRFSFQPLPENPLLGPSQSKLDEMGALRRSLLTENHQTWRLFTFPFLHAGLLHLVINLCSVIYVGVHLEQEFGPLRIGIIYTLSAFVGALVASLFLQNTPAVGSSGALFGLLGTLLSELVWNWKFHSNKISAIASLVSVFVCNFVLGFLPYVDNFSSIGGFISGFLIGSVFLLNPHQQVAPNKGGLIDYSIKSYIKLKLKEMLHRPLLQIASLNLFNLLLVGCLVAVLYGININSYCTWCPYVDCIPFTSWHCKDIETSCETMVSNAQLTMTCIGNGNYRVFPFTNISRARINDLCNLIC* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0130 376 Pfam Rhomboid family 110 249 IPR022764 GO:0004252|GO:0016021
Apr1g0130 376 PANTHER RHOMBOID-RELATED 18 376 IPR002610 GO:0004252|GO:0006508|GO:0016021
Apr1g0130 376 Gene3D - 35 251 IPR035952 -
Apr1g0130 376 PANTHER RHOMBOID-LIKE PROTEIN 8 18 376 - -
Apr1g0130 376 SUPERFAMILY Rhomboid-like 38 253 IPR035952 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0130 Apr-Chr1 1481839 1484519 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0130 - - gmx:100775875 614.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0130 1 1481839 1484519 Apr1g0130 1 1481839 1484519 ECH