Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0128 ATGAGCAATCTGAGAACCCTATGTAGACCTCAAACGCTGTTCTCTTTCATTAGTTGTAGACACCAATTTCGATTTAGGGCTTCGTTTCGAAACCCTAATTGCAAGCCCCGTTTGCCATCGCCTTCTCTGTATTTTACGACCGGTTCTTCCGGTTCGAATCCCTGGTTTCGCGTGAATCAGAGGAGAACTGTGGCCAAGGCATCAAACTGGGCTGAACAAAAATCCCCATATGAAACACTTGAATTGGAAGGAGATGCTGATGATGAGCAGATAAAGATTGCTTATAGACGTTTGGCCAAATTTTATCATCCAGATGTCTATGATGGTAGAGGAACCCTTGAGGAAGGTGAAACAGCAGAAGCTAGGTTCATCAAGATTCAAGCTGCTTATGAACTGCTTATAGATGGGGAGAGGCGGAGACAATATGATATGGATAACAGGGTCAACCCTATGAAGGCATCTCAAGCGTGGATGGAGTGGCTTATGAAAAAGCGAAAAGCTTTTGATCAGCGGGGTGATATGGCAATTGCTGCTTGGGCTGAGCAGCAACAGCGCGAGTTGAATATTCGTGTGCGTCAACTTTCCCGTTCAAAGATAGATCCTGACGAAGCAAGGAAGATCTTGGCAAGAGAAAAGAAGGCTTCAGCTGAATATTTCTCTAATACCCTTAAAAGACACACACTTGTACTGAAGAAAAGAGATTTGATGCGAAGAAAAGCTGAGGAAGAAAAGAAGAAGACTATTAGCCGGCTCTTGGCAGATGAAGGTCTTGAACTTGATCCAGATAGTGATGATGAGACACTGTAG 807 0.4399 MSNLRTLCRPQTLFSFISCRHQFRFRASFRNPNCKPRLPSPSLYFTTGSSGSNPWFRVNQRRTVAKASNWAEQKSPYETLELEGDADDEQIKIAYRRLAKFYHPDVYDGRGTLEEGETAEARFIKIQAAYELLIDGERRRQYDMDNRVNPMKASQAWMEWLMKKRKAFDQRGDMAIAAWAEQQQRELNIRVRQLSRSKIDPDEARKILAREKKASAEYFSNTLKRHTLVLKKRDLMRRKAEEEKKKTISRLLADEGLELDPDSDDETL* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0128 268 CDD DnaJ 76 135 IPR001623 -
Apr1g0128 268 PANTHER CO-CHAPERONE PROTEIN DJLA 53 266 - -
Apr1g0128 268 Pfam DnaJ domain 76 143 IPR001623 -
Apr1g0128 268 PANTHER LD30543P 53 266 - -
Apr1g0128 268 ProSitePatterns Nt-dnaJ domain signature. 123 142 IPR018253 -
Apr1g0128 268 SMART dnaj_3 74 138 IPR001623 -
Apr1g0128 268 ProSiteProfiles dnaJ domain profile. 75 146 IPR001623 -
Apr1g0128 268 Gene3D DnaJ domain 60 159 IPR036869 -
Apr1g0128 268 PRINTS DnaJ domain signature 77 95 IPR001623 -
Apr1g0128 268 PRINTS DnaJ domain signature 95 110 IPR001623 -
Apr1g0128 268 PRINTS DnaJ domain signature 118 138 IPR001623 -
Apr1g0128 268 PRINTS DnaJ domain signature 164 183 IPR001623 -
Apr1g0128 268 SUPERFAMILY Chaperone J-domain 36 142 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0128 Apr-Chr1 1471791 1474608 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0128 - - gmx:100808285 483.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0128 1 1471791 1474608 Apr1g0128 1 1471791 1474608 ECH