Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0125 ATGCTTTATACTGCTCTAAAAGCAAGTAGATTCTTCTACCAGCCTAGGGTAACCCTTGGTTTGTCCATTACCATTAGTGATTCTGTTCATCATTCAGGATTTTGTTCAATGAAAGAAATCGATTCTGAGGTGAATTCTAGTTTGTGTACTCTTGCCCCCAGTACAGAACCCTGCATCACAGATTCTTTATCAGTTAGTGGGAACCGTACCACGTCATCTATAAGTGTACAATCCACCCCTGAAATTGAAAAGAAGTTTGTGCATCATGTTTATGATGCTATTGCTCCACATTTCAGTTCCACCCGGTTCGCCAAGTGGCCAAAGGTTGCTGCTTTTTTGTCATCATTGCAATCTGGATCACTTGTTCTGGATGCAGGATGTGGGAATGGAAAATACTTAGGTTTAAATCATGATTGCTTTTTTATAGGATGTGATATAAGTCCTTCCTTGATTAAAATATGCTCAGATAGAGGGCATGAAGTTTTGGTTGCAGATGCTGTGAATCTTCCGTACAGAACTGGTTTTGGTGATGCAGCAATATCTATAGCTGTGTTACATCATTTAAGCACTGAAAATAGAAGGAGAAAAGCAATAGAAGAATTGGTCAGAGTTGTTAAAAAGGGTGGTCTTGTTCTGATTACAGTTTGGGCTGTAGAACAAGAGGATAGTTCGCTGATTACAAAATGGACTCCACTGACGGAGAAGTATGTTGAGGAGTGGGTCGGACCAGGAAGTCCTCGTGCTCGGCCCCCCTCATCCTTATCATTAGAAAGTATTCCTGAAAGTGAGGAGAGTGGCTCTGGTGAGCTTATGAAAGTTTGCAATGAGTCAAGAGCATCAAGAGTTTTTGAGGAAGAAATAAATATGAAGAATCAACAGGAATACTTTGTTCCTTGGCATTTACCTTATCATCGTGCTGAAATAAGTGGTGCTTCTGCCCATGCTCTTGCTGCTGGTCTGGCAACTAAAGATGACAAAAAGGGTGCTGTGGTGTATAATAGATATTATCATGTTTTTAGTGAAGGCGAACTTGAAAGTTTGACAACTGGAATAAACAATGCTAGAATTGTTGATCAGTTTTTTGATAAATCCAACTGGTGTATTATTCTTGAGAAGACGATATGA 1125 0.3982 MLYTALKASRFFYQPRVTLGLSITISDSVHHSGFCSMKEIDSEVNSSLCTLAPSTEPCITDSLSVSGNRTTSSISVQSTPEIEKKFVHHVYDAIAPHFSSTRFAKWPKVAAFLSSLQSGSLVLDAGCGNGKYLGLNHDCFFIGCDISPSLIKICSDRGHEVLVADAVNLPYRTGFGDAAISIAVLHHLSTENRRRKAIEELVRVVKKGGLVLITVWAVEQEDSSLITKWTPLTEKYVEEWVGPGSPRARPPSSLSLESIPESEESGSGELMKVCNESRASRVFEEEINMKNQQEYFVPWHLPYHRAEISGASAHALAAGLATKDDKKGAVVYNRYYHVFSEGELESLTTGINNARIVDQFFDKSNWCIILEKTI* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0125 374 PANTHER BNAA05G09210D PROTEIN 72 367 - -
Apr1g0125 374 Pfam Methyltransferase domain 123 213 IPR013216 GO:0008168
Apr1g0125 374 Gene3D Vaccinia Virus protein VP39 98 373 IPR029063 -
Apr1g0125 374 CDD AdoMet_MTases 122 218 - -
Apr1g0125 374 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 75 238 IPR029063 -
Apr1g0125 374 MobiDBLite consensus disorder prediction 242 269 - -
Apr1g0125 374 PANTHER UNCHARACTERIZED 72 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0125 Apr-Chr1 1452337 1455560 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0125 K10770 - gmx:100784028 585.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0125 1 1452337 1455560 Apr1g0125 1 1452337 1455560 ECH