Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0116 ATGATGTTAGGGAAAAGACCTCGTCCTCCCATGAAGAGAACCACAAGCATGTCAGAGATAACCTTCGATCTGAACACAACCTTGGACGATGATCCCAACAACTCCTTATTAAACCCGCATGGACCAGGAGGTTCCGATGGGCCTGGCCCATGGCCCAATCACCCCCCCGTTGGGTTCAACGGTTCAGATCAGAGTAGGGTTTTGGCCACTGTTTCGCCCAGAAACCATAGTAGACATTCCCCGGATTTGGCACACACCCCTGACTTCTTACGCGCTTGCTTTCTCTGCAAACGCCGTTTGGGACCCGGCCGTGACATCTACATGTACAGGGGTGATAGTGCTTTCTGCAGTCTAGAATGCCGCGAAAAGCAAATGAAGCAGGACGAGAGCAAGGATAAGTGTTATGTGGCATTGAAGAAACAAGTTGTTGTTGCGCCTTCTGGGTCGCAAGTAACTACCAAAGGCGAAACCGTGGTTGCCTTGTAG 486 0.5103 MMLGKRPRPPMKRTTSMSEITFDLNTTLDDDPNNSLLNPHGPGGSDGPGPWPNHPPVGFNGSDQSRVLATVSPRNHSRHSPDLAHTPDFLRACFLCKRRLGPGRDIYMYRGDSAFCSLECREKQMKQDESKDKCYVALKKQVVVAPSGSQVTTKGETVVAL* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0116 161 MobiDBLite consensus disorder prediction 14 40 - -
Apr1g0116 161 PANTHER FCS-LIKE ZINC FINGER 5 1 159 - -
Apr1g0116 161 PANTHER FCS-LIKE ZINC FINGER 5 1 159 - -
Apr1g0116 161 Pfam zinc-finger of the FCS-type, C2-C2 84 131 IPR007650 -
Apr1g0116 161 ProSiteProfiles Zinc finger FLZ-type profile. 88 132 IPR007650 -
Apr1g0116 161 MobiDBLite consensus disorder prediction 58 77 - -
Apr1g0116 161 MobiDBLite consensus disorder prediction 1 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0116 Apr-Chr1 1280276 1281283 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0116 - - aprc:113852663 312.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0116 1 1280276 1281283 Apr1g0116 1 1280276 1281283 ECH
Apr9g0910 9 17526902 17528013 Apr1g0116 1 1280276 1281283 PCT