Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0115 ATGGCTTCGAGGGTAGTCTTATTGTTGGCTATGTGCGTTCTTCCGGCGATGGTTGTAGCCATACGCCCAGCCAAGAACCCTTTTTGCGTTAAGGGTCAAGTCTACTGTGACCGTTGCCGTGCTGGTTTTGAGACCTCCGCCACCACCTACATTGCTGGTGCGGAGGTTGAATTGCAATGCAAGAACAGGGTTACGAACGAGGTTGTATACTCGAAGAAGGGGTGGACTGACCGAACAGGATCATACAAGATTTGGGTGAATGAGGATCACGCAGATGAAGTGTGTGATGCCAAGCTTGTAGACAGTCATCACTCTCAGTGTACGGAAGCCACTCCAGGGCGTGACCAAGCACGGGTTATTCTTACACGTTACAATGGCATTGCCTCAGATGATAGGTTCGTCAATGCTATGGGCTTCATGTCGGAGGAGGTTGCTTCGGGCTGTGCAGATATCCTCAGGCAATACCAGGAGTTCGATAATGAGAATTAA 489 0.499 MASRVVLLLAMCVLPAMVVAIRPAKNPFCVKGQVYCDRCRAGFETSATTYIAGAEVELQCKNRVTNEVVYSKKGWTDRTGSYKIWVNEDHADEVCDAKLVDSHHSQCTEATPGRDQARVILTRYNGIASDDRFVNAMGFMSEEVASGCADILRQYQEFDNEN* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0115 162 PANTHER ALLERGEN-LIKE PROTEIN BRSN20 2 161 - -
Apr1g0115 162 Pfam Pollen protein Ole e 1 like 30 111 - -
Apr1g0115 162 PANTHER PROTEIN DOWNSTREAM OF FLC-RELATED 2 161 IPR006041 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0115 Apr-Chr1 1273574 1275001 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0115 - - gmx:100305566 281.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0115 1 1273574 1275001 Apr1g0115 1 1273574 1275001 ECH
Apr9g0913 9 17578470 17579666 Apr1g0115 1 1273574 1275001 PCT