Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0104 ATGGATTCTGGTAATAGTGGAAGTATCTCTTCTAGTGGCGATGAAGAATATGATTCACATGCTCATCCATCGTTCCTTAATCATCCAAACTCCCATTTTGGCTCCATCTCTCATGCCCAATCGCCCCTCGTTGATCCTTCTCATCCCCCAATGTTTGATCTATCTTCAGCCTACCTCCGCACCCTCCCTCAATCCCAGCCAAACCAAAATCCCCATTCCTTGTTAAATTTGGACCCTCAAGCCCAAAGATCTGAACCCAATTACAGCCACCCTACAAGCTTACCATCTTCATCGGATCCTCAACCCTCATCTTTACCGATTACCAACAACGTAGTAAGAAACTCAAAGAAGCGAAGCAGAGCTTCAAGGCGTGCTCCCACCACGGTTCTCACCACCGACACCACCAATTTCAGATCCATGGTTCAAGAATTCACTGGAATCCCTGCACCACCCTTCTCCTCCTACTCTCGCCGCCCAAACCCATTGCTTTCAACTCCAAGAACCTTGTTACACAACAATATCAACATGACCTCTCCCAATAACGCTACCAATAACTCCATTAACTACCAACTACCTCCTGATCTATCTCTACCCTATCACAACCCACACAACATCATGCAAAATCACCCTACACTCGCATTCCAATCCTCTCCTCCTCTTCACACTCTTCTCCCTGCAAAGTCTTTACCCATGCCATCGTTTGATGATGATGTGGGTGTGAGCCATGGCCATGTGAATGTGCATATGATGGCTACTACTAATGGAATATCTGGTCATGAACACGTGGCTTCTGAGAACATGCCTCTGAGGAGCGCTGGTGCTGATGCTTGTAGAGATCCGTTTAGGTCTTTAGATGGGAACTATGGTAGCTGCAAGCTAAACATTTCATCTTCTGTTTCGAGTGGCTTGAACCATCATGAGAAGACCTTAGAGAATGTGTCCCCAAGAGGGGAAGGTGCCGTGGATGCGTGGATTTGTTCTTCTGATCAATAG 993 0.4673 MDSGNSGSISSSGDEEYDSHAHPSFLNHPNSHFGSISHAQSPLVDPSHPPMFDLSSAYLRTLPQSQPNQNPHSLLNLDPQAQRSEPNYSHPTSLPSSSDPQPSSLPITNNVVRNSKKRSRASRRAPTTVLTTDTTNFRSMVQEFTGIPAPPFSSYSRRPNPLLSTPRTLLHNNINMTSPNNATNNSINYQLPPDLSLPYHNPHNIMQNHPTLAFQSSPPLHTLLPAKSLPMPSFDDDVGVSHGHVNVHMMATTNGISGHEHVASENMPLRSAGADACRDPFRSLDGNYGSCKLNISSSVSSGLNHHEKTLENVSPRGEGAVDAWICSSDQ* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0104 330 MobiDBLite consensus disorder prediction 62 115 - -
Apr1g0104 330 Pfam VQ motif 124 151 IPR008889 -
Apr1g0104 330 MobiDBLite consensus disorder prediction 24 42 - -
Apr1g0104 330 PANTHER VQ MOTIF-CONTAINING PROTEIN 1 105 IPR039609 -
Apr1g0104 330 PANTHER VQ MOTIF-CONTAINING PROTEIN 171 329 IPR039609 -
Apr1g0104 330 PANTHER VQ MOTIF-CONTAINING PROTEIN 109 158 IPR039609 -
Apr1g0104 330 MobiDBLite consensus disorder prediction 1 49 - -
Apr1g0104 330 MobiDBLite consensus disorder prediction 62 128 - -
Apr1g0104 330 PANTHER VQ MOTIF-CONTAINING PROTEIN 1 105 - -
Apr1g0104 330 PANTHER VQ MOTIF-CONTAINING PROTEIN 171 329 - -
Apr1g0104 330 PANTHER VQ MOTIF-CONTAINING PROTEIN 109 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0104 Apr-Chr1 1141866 1142858 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0104 - - gsj:114410527 305.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0104 1 1141866 1142858 Apr1g0104 1 1141866 1142858 ECH
Apr9g0922 9 17754179 17755626 Apr1g0104 1 1141866 1142858 PCT