Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0099 ATGGCCGGTGGGGGATTCGCCGTTGATGCACCAACAAAAGGCTTTGATGGCAAGATAACAATCTCAGTTATCATGACGTGCATCGTTGCTGCGTCGAGTGGACTTATTTTTGGATATGACGTCGGAGTTTCAGGAGGTGTGACAACGATGATACCGTTTCTAAAGAAATTTTTTCCGTCAATACTGAGAAAGGCAGCTGGTGCCGAAGTAAACATGTATTGCGTGTATGACAGTCAAGTGTTGACGTTGTTCACGTCTTCTCTGTACCTTGCTGGGTTAGTCTCATCTCTTGCAGCTAGTCGAGTCACGATGGCGTTGGGTCGGAGAAACACCATCATGTTGGGTGGTGCCATCTTTCTCGTCGGTGGTGCAATTAATGGAGGAGCTGAAAATATTGCTATGCTCATCTTGGGCCGTATCCTTCTCGGCCTTGGGGTCGGCTTCACTAATCAAGCTGCACCACTGTACCTGTCTGAAATCGCTCCACCAAAATGGCGAGGTGCATTCAATACAGGCTTCCAATTTTTCTTAGGAGTGGGTGTAGTTGCGGCAGGGTGCATTAATTATGGTACTGCAAAGCACAGTTGGGGCTGGCGACTTTCGCTTGGGCTTGCGGTGGTGCCTGCAGCAGTAATGACCGTTGGTGCGTTCCTTATATCCGACACACCAAGCAGCTTGGTTGAACGTGGGAAATTTGACGAAGCCAGAATTGCCTTGCGCAAAATTAGAGGATCCTCCGTCGATGTTGAACCCGAGTTGGAAGAACTCATTAGTTGGTCACAAGTTTCTAAATCTATTGACCAAGAGCCCTTCATGACCATATTTGAGAGGCAATATCGCCCTCACTTGGTCATGGCCTTTTTTATCCCCTTTTTCCAGCAACTTACGGGGATCAACATTGTCGCATTCTATTCACCTAACCTCTTTCAGTCTGTGGGTTTAGGAAATGACGCAGCTTTACTTTCTACCATTATACTTGGAGTTGTTAACCTGCTTTCTATTCTCATATCCACTTCTTTTGTTGATCGTTTTGGTCGAAGATTCTTGTTCATAACCGGTGGCATTCTCATGTTTGCCTGTCAGATTGCGGTCTCTGTCTTACTAGCAATGGTGACCGGGATTCATGGTACGAAGGAGATATCGAAAGGTAACGCGATTTTGGTGTTGGTGCTACTCTGTTTCTACGCTGCAGGTTTTGGTTGGTCATGGGGCCCTCTCACCTGGCTAATTCCCAGTGAAATTTTCCCCTTAAAAATCAGAACCACTGGGCAAAGCATAGCAGTTGGGGTGCAATTCATAACACTGTTTGCGTTGTCCCAAACATTCTTGACAATGCTTTGCCACTTTAAGTTTGGCGCCTTCTTGTTCTATGCGATTTGGATTGGAGTGATGACCATCTTTGTTATATTTTTCTTACCCGAGACCAAAGGAATTCCTTTAGAATCAATGTACGTCATATGGGGCAAACACTGGTTTTGGCGGCGGTTTGTTAAAGGAGTAGATGACCAAGCTAATCTTCCATGA 1524 0.4593 MAGGGFAVDAPTKGFDGKITISVIMTCIVAASSGLIFGYDVGVSGGVTTMIPFLKKFFPSILRKAAGAEVNMYCVYDSQVLTLFTSSLYLAGLVSSLAASRVTMALGRRNTIMLGGAIFLVGGAINGGAENIAMLILGRILLGLGVGFTNQAAPLYLSEIAPPKWRGAFNTGFQFFLGVGVVAAGCINYGTAKHSWGWRLSLGLAVVPAAVMTVGAFLISDTPSSLVERGKFDEARIALRKIRGSSVDVEPELEELISWSQVSKSIDQEPFMTIFERQYRPHLVMAFFIPFFQQLTGINIVAFYSPNLFQSVGLGNDAALLSTIILGVVNLLSILISTSFVDRFGRRFLFITGGILMFACQIAVSVLLAMVTGIHGTKEISKGNAILVLVLLCFYAAGFGWSWGPLTWLIPSEIFPLKIRTTGQSIAVGVQFITLFALSQTFLTMLCHFKFGAFLFYAIWIGVMTIFVIFFLPETKGIPLESMYVIWGKHWFWRRFVKGVDDQANLP* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0099 507 TIGRFAM SP: MFS transporter, sugar porter (SP) family 21 482 IPR003663 GO:0016020|GO:0022857|GO:0055085
Apr1g0099 507 PANTHER SUGAR TRANSPORTER 3 501 - -
Apr1g0099 507 PRINTS Sugar transporter signature 34 44 IPR003663 GO:0016020|GO:0022857|GO:0055085
Apr1g0099 507 PRINTS Sugar transporter signature 136 155 IPR003663 GO:0016020|GO:0022857|GO:0055085
Apr1g0099 507 PRINTS Sugar transporter signature 293 303 IPR003663 GO:0016020|GO:0022857|GO:0055085
Apr1g0099 507 PRINTS Sugar transporter signature 389 410 IPR003663 GO:0016020|GO:0022857|GO:0055085
Apr1g0099 507 PRINTS Sugar transporter signature 412 424 IPR003663 GO:0016020|GO:0022857|GO:0055085
Apr1g0099 507 Pfam Sugar (and other) transporter 27 487 IPR005828 GO:0016021|GO:0022857|GO:0055085
Apr1g0099 507 Gene3D MFS general substrate transporter like domains 11 490 IPR036259 -
Apr1g0099 507 ProSitePatterns Sugar transport proteins signature 2. 141 166 IPR005829 GO:0016021|GO:0022857|GO:0055085
Apr1g0099 507 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 3 501 IPR045262 GO:0015144
Apr1g0099 507 CDD MFS_STP 29 474 IPR044778 GO:0015145|GO:0015749
Apr1g0099 507 ProSiteProfiles Major facilitator superfamily (MFS) profile. 26 476 IPR020846 GO:0022857
Apr1g0099 507 SUPERFAMILY MFS general substrate transporter 29 482 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0099 Apr-Chr1 1088740 1092026 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0099 50 498 Organic Solute Cotransporters AT1G34580 66.814 0.0 606
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0099 K24193 - gmx:100818222 859.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0099 1 1088740 1092026 Apr1g0099 1 1088740 1092026 ECH