Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0096 ATGGCAATGCCGGGAAGGGACCTCTGCCATAAACAAGATTCACATTCTCCTCTCATTTTCTTCAATCCCACTTCGGATTTCGGTTCCTTCTCTGGAGGGTTGTTTCTCGACCCCAAAATCCCCGATTCCTTTGTTCGCCTCATTTCGTTGCAGATTCCTCCCACTGCTTTTTCCGATTCAAATCTTCACCGCCGACGGAGGAGGGTTTTGCCGGGGTGTTTCTTATCGGTGAGTTTGCCGAGTGCTAAACTCGTTGCCGAACCCAAGGCGCACGTGCTGCAAAATGGTGACCACGTGTCGGACTCGGACGGCCTTGTTCAGCAGAGAAAGGTTAGGGTACGAGGAGGCAATGCCCTTAACACCACTAAGCACCTCTGGGCTGGTGCTATAGCTGCTATGGTTTCTAGAACTTGTGTTGCTCCACTTGAAAGACTTAAGTTGGAGTACATAGTTCGTGGTGAGAAGAAGAATATATTTGAGCTTATTAGAAGGATTGCCGCTTCTCAAGGTTTGAGAGGGTTTTGGAAAGGGAACCTTGTGAATATCCTGCGAACGGCTCCATTCAAAGCGGTTAATTTTTGTGCTTATGATACCTATAGAAAGCAATTGCTCAGATTTTCTGGGAATGAGGAAACTACAAATTTTGAGAGGTTTATTGCTGGTGCTGCTGCTGGGATTACTGCTACCATTATTTGCTTGCCACTTGACACTATCCGGACCAAGCTGGTGGCACCAGGTGGAGAAGCTTTGGGCGGGGTAATTGGTGCCTTTCAATACATGATTCGAACTGAAGGATTCTTTTCTCTTTACAAGGGTTTAGTACCATCAATTATTAGTATGGCTCCTTCCGGTGCAGTTTTTTATGGTGTATATGATATCTTGAAATCAGCTTATCTGCATTCACCGGAAGGAATGAAGAGAATTCAGAATATGCATAAACAGGGGCAGGAACTGAGTGCCTTTGATCAGCTTGAATTGGGGCCAGTAAGGACATTGTTAAACGGGGCTATTGCTGGTGCATGTGCAGAAGCTGCTACATACCCCTTTGAAGTGGTTAGGAGGCAGCTTCAATTGCAAGTCCAGTCTACTAAATTAAGTTCTTTAGCAACTTTTGTCAAAATAGTTGAACATGGAGGCATTCCAGCTCTGTATGCAGGACTTATTCCCAGCTTACTACAGGTACTTCCTTCAGCTTCAATAAGTTACTTTGTCTACGAGTTCATGAAGATTGTTCTCAAAGTGGAGTAG 1248 0.4511 MAMPGRDLCHKQDSHSPLIFFNPTSDFGSFSGGLFLDPKIPDSFVRLISLQIPPTAFSDSNLHRRRRRVLPGCFLSVSLPSAKLVAEPKAHVLQNGDHVSDSDGLVQQRKVRVRGGNALNTTKHLWAGAIAAMVSRTCVAPLERLKLEYIVRGEKKNIFELIRRIAASQGLRGFWKGNLVNILRTAPFKAVNFCAYDTYRKQLLRFSGNEETTNFERFIAGAAAGITATIICLPLDTIRTKLVAPGGEALGGVIGAFQYMIRTEGFFSLYKGLVPSIISMAPSGAVFYGVYDILKSAYLHSPEGMKRIQNMHKQGQELSAFDQLELGPVRTLLNGAIAGACAEAATYPFEVVRRQLQLQVQSTKLSSLATFVKIVEHGGIPALYAGLIPSLLQVLPSASISYFVYEFMKIVLKVE* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0096 415 ProSiteProfiles Solute carrier (Solcar) repeat profile. 326 411 IPR018108 -
Apr1g0096 415 ProSiteProfiles Solute carrier (Solcar) repeat profile. 212 297 IPR018108 -
Apr1g0096 415 Gene3D Mitochondrial carrier domain 115 414 IPR023395 -
Apr1g0096 415 ProSiteProfiles Solute carrier (Solcar) repeat profile. 119 202 IPR018108 -
Apr1g0096 415 PRINTS Mitochondrial carrier protein signature 124 137 IPR002067 GO:0055085
Apr1g0096 415 PRINTS Mitochondrial carrier protein signature 137 151 IPR002067 GO:0055085
Apr1g0096 415 PRINTS Mitochondrial carrier protein signature 177 197 IPR002067 GO:0055085
Apr1g0096 415 PRINTS Mitochondrial carrier protein signature 227 245 IPR002067 GO:0055085
Apr1g0096 415 PRINTS Mitochondrial carrier protein signature 270 288 IPR002067 GO:0055085
Apr1g0096 415 PRINTS Mitochondrial carrier protein signature 335 357 IPR002067 GO:0055085
Apr1g0096 415 SUPERFAMILY Mitochondrial carrier 117 408 IPR023395 -
Apr1g0096 415 Pfam Mitochondrial carrier protein 212 299 IPR018108 -
Apr1g0096 415 Pfam Mitochondrial carrier protein 326 412 IPR018108 -
Apr1g0096 415 Pfam Mitochondrial carrier protein 119 204 IPR018108 -
Apr1g0096 415 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 25 415 - -
Apr1g0096 415 PANTHER SOLUTE CARRIER FAMILY 25 25 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0096 Apr-Chr1 1062035 1065390 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0096 197 409 Organic Solute Cotransporters AT5G64970 19.249 4.88e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0096 - - gmx:100816623 697.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0096 1 1062035 1065390 Apr1g0096 1 1062035 1065390 ECH