Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0090 ATGCCCATGGCCACGCCGGAACCCTCCACCGACCACATCGACTCTCTTCCGCTAATTGACCTTCGCCTTCTCTCTCAATCCGAACTCTACTCTCTCTCCCTTTCTGGCGCCACTCACCGTCACCGCCGCAACGACAACGATTCCGTTATCCCCAAAATCGACCGTTCCGTTTTCAACGAATCCGCCGGAAGTCGCAAGCAAACCTTCTCTCGCCTACGCCTCAACAAACAAAACGTCGCCGTTCCCGCGTCCTCCTTCCACATTCCCCTCCACATTCCCGAGCCCGTCGACGAAGAGAATTCCCAAATTATCGCTCTGCTGCAAGAACTCTTCGGCGTCGAGTCCCTTCGCAACGCTCAGCACCATGATGGCGACGACCGTGGCCTCGTTCCCGTTCAGGTTGAATTTAAACAACCGCCTCCGGAATCGCCGGCCTTCCAGAACATTCCGATCGACGTCGTCGACGGTGGTCAGAGGAAGAGGAAGCGCGGGCGGCCGCGGAAGAACGAGAATTTGGAGGAGGAGGAGCCGAGGAACGTTAACGTTAACGGCGAGGGGAAAGCGGTGGCAATGCTGAACGATAAGGGTTTTGTGGTTGACGCCGTTCGGTTGGCGGATTCTGGGGATCCGTTTGGGGAGGAGTTGAAGAGAAGGACCGAAGGGTTGGAGACGGAGTCTCAGTTGTTGGAATTTTTAGAAACTTTGAATGGAGAATGGGGGAGTCAGAGGAAGAAGAGAAGGATTGTGCAGGCTAGTGATCTCGGTGACTTGCTGCCTGCGGGATGGAGGATCGTGCTCTGTGTTCTGAGGAGAGCAGGTCGTGCTTCTGTTGTTTGTCGCCGTTACGTAAGCCCTGATGGACACCAGTTTGAGTCATGCAAGGAAGTTTCTGCATACTTGCTTTCCTTTTTCGGTGTTCAAGATATAAGCTGTCTAAAATCTAGTTATACTGATGGTAGTCAGCAGTTGTCCAGCAGTATCAATTTGGCATCTGAAAGTCAGAGTGTAAGTCATGTGCCAACAGGAGATATGAAGACTAATGCCAATGCAAGTTATTTGTGTTTAGTTGGTGCATCTATGCACTCTAATCATGAGAAGCAGACCCCCATATCATCATCAATTGAAAGTGAAAATTTCAGTGGTGATCTGGCCTTGGCTTGTAAATTAGGAGATACTACTGTTGGAGCCATTGACCATCAAACTGAAGATAAGAAACTATTTAAGGCTGATAAGAACGACGGAAATTCAGTTCAGGGATGTTCTCTCATGGAAGATAGAGGTTGTAATGTGAGTGGTGAGAAGTTGGTTGGTGCTAGTGAAGCTAGCAATGCTGCATGCAATCTATATATTCCTTTGGTTTTCTCAACTCCTTTCTCCAATGATAATAACAGTGGTCAATTTTCTGATGAAGTAAATGCTGTCACATGCATAAAAGGCAGCATTAGTAATTTTGCTAGTCAGGATAGAAATAGTGGGTGCAATGAAACTGTTACCTGTGGAAACCAGCAAAAACATGTTGACAACAATGAGTTTGGGCTTTCTGTGAAATTAGTTGGGAACGTTCAGAAAACAGGTTTTGAAAGCAGCATGCTGGCTCCAAATTCTGAAGGCAAAAATTTTGCTGGTAAAAATTTAGAGGATGGGCATCTTACTTGCTCCTTGGAGGACATGGAGGTTAGAGATGAAAAGACCATTAAGGATGATGAGCAGAAAACTATTGGTAGCAAAGACCAGCCTGAAGTTAAAAATGTATCTACTGATGTTAAGCTGCAGACTAGTTCTGAAGGTTGTTCACTTGTCCCATCTCAGAATGAACTTAAGCATACTTCTATAAATAGTATGAACAGGACACAAACTTCCATGCTGAAGGACTCTGCTGAGGAGAATATTTTTGATAGTGATTTATTTAGCTCATCTATTGATGAGAGAACATATGTTCACAGTAATTACATTGGTAATGTTTCTTTTAGCTCTTGCACACAAGATGCATCTGAGTCTGGTGGAGTTCATTTTGTTTCTGATCTTAAAGTAACTGAGGATGTCAGTTACAATCAGATTCCTGCAAATGAGGAAGCTGCGACTAGTTGTTTAGAGGAAAGGAGTTCCTTGAATGATGAAAATTACTCCATGGACAATCTGTTCCACAGAAGTTCTGAAAGTAACTTATATGCTCTAACTGGCAATCAGCATGTTTCTGCTTTTCATGATAATTTGAATAATATTTCTTCTGGAACCTTTGATGCACTCAAAGCTGTTGATGCTGGTTACATAACGCCCCAGTTAGGCACTGTTTCTTGTGGCAATGTTGTTGCTGAGGATGCATACACTACTGCAAGCATTATGCAGGGAAAATCCCAAGGATGTGTATCTGTTGCTCTTGGCGAAAGTATATTAACCCAATTTGACAAGCAAAGCGATGATGGTGTTAATAAAGCTAATAAATCTTGCTTACCAGGGAAGGTTAAGAATGAAGTTGAAATTTCCCAAACTGACTCTATAGGTCTGCCCAAATTGCAGTAG 2520 0.4452 MPMATPEPSTDHIDSLPLIDLRLLSQSELYSLSLSGATHRHRRNDNDSVIPKIDRSVFNESAGSRKQTFSRLRLNKQNVAVPASSFHIPLHIPEPVDEENSQIIALLQELFGVESLRNAQHHDGDDRGLVPVQVEFKQPPPESPAFQNIPIDVVDGGQRKRKRGRPRKNENLEEEEPRNVNVNGEGKAVAMLNDKGFVVDAVRLADSGDPFGEELKRRTEGLETESQLLEFLETLNGEWGSQRKKRRIVQASDLGDLLPAGWRIVLCVLRRAGRASVVCRRYVSPDGHQFESCKEVSAYLLSFFGVQDISCLKSSYTDGSQQLSSSINLASESQSVSHVPTGDMKTNANASYLCLVGASMHSNHEKQTPISSSIESENFSGDLALACKLGDTTVGAIDHQTEDKKLFKADKNDGNSVQGCSLMEDRGCNVSGEKLVGASEASNAACNLYIPLVFSTPFSNDNNSGQFSDEVNAVTCIKGSISNFASQDRNSGCNETVTCGNQQKHVDNNEFGLSVKLVGNVQKTGFESSMLAPNSEGKNFAGKNLEDGHLTCSLEDMEVRDEKTIKDDEQKTIGSKDQPEVKNVSTDVKLQTSSEGCSLVPSQNELKHTSINSMNRTQTSMLKDSAEENIFDSDLFSSSIDERTYVHSNYIGNVSFSSCTQDASESGGVHFVSDLKVTEDVSYNQIPANEEAATSCLEERSSLNDENYSMDNLFHRSSESNLYALTGNQHVSAFHDNLNNISSGTFDALKAVDAGYITPQLGTVSCGNVVAEDAYTTASIMQGKSQGCVSVALGESILTQFDKQSDDGVNKANKSCLPGKVKNEVEISQTDSIGLPKLQ* 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0090 839 MobiDBLite consensus disorder prediction 137 178 - -
Apr1g0090 839 SUPERFAMILY DNA-binding domain 254 303 IPR016177 GO:0003677
Apr1g0090 839 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8 7 781 - -
Apr1g0090 839 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 248 321 IPR001739 GO:0003677
Apr1g0090 839 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8 7 781 IPR037472 -
Apr1g0090 839 Pfam Methyl-CpG binding domain 257 300 IPR001739 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0090 Apr-Chr1 1005713 1016125 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0090 - - gmx:100780637 1104.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0090 1 1005713 1016125 Apr1g0090 1 1005713 1016125 ECH