Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0088 ATGGCTTGGCGCTTCTTCTTCTTCTCAAACATCAAATCCTCTAAAACCCTAACAATTGGGAACCCTAATGGCGCCCCCTTTTCCACCTCCTTCCTCATCACCAAAACCCCCAAAAAATACAAGAAAAAACGCAAACCCAAAAACAGCCCGCGAACCAACCCCATCCAAACCCAACCCAATTGCATTCCCGAACTCGAACGCATAGTTGAGCGCGACGCTCTCTTCCGATTCGTTACGCGCTCAAAACAATTCCTCTCCGCCCAACCGGAGCACGTCCTCCGCCTCGACGACGCCGGCAAGCTCCACCGCGAGCTCGGCTTCCCCCGCGGCCGCAAGCTCTCGCGCTTCCTCCAACAACACCCCCTCCTCTTCCAAACCTACCGCCACAGCGACTCCAAAATGTGGCTCGGCTTCACCGACCTTATGGAACACCTCGTCGCAGAGGAACAATCCCTCATGGATTCCATGGAACTCAATCGCGTCGACAAGGTTCGAAAACTCCTCATGATGTCCGCGCGTAACCGCATTTCCCTCAGCAAGATCCACCATTGCAGGACCCTGTTCGGCATCCCCGATAATTTCAGAGATAGGGTTTTGAAGTATCCCGAATTTTTTAGGATTGTGGATGAGAACGATGGGAAGAGGGTTCTTGAGTTGGTTAATTGGGACCCTCATTTGGCAGTGAGTGCGCTTGAGAGGGAGTTTATGGTTGATGAAAACGCTGCTAAGAGGAAGTTTAGGTTTCCTGTGAAATATGGGAAGGATTTGGATATAGGGTTGGATGATTCGAGGAAGCTTAATTTGTTGAACACGCTTCCTTTGGTGTCTCCTTATTCGGATGGGTCTAAATTGGACGTGTGGAGTTTGGAGGCGGAGAAGTACAGGGTTGGGGTGATTCATGAGTTCTTGAGCTTGACGTTGGAGAAGAGAGCCTCTATTCATCACCTTGTGGAGTTTAAGGAAGAGTTTAGTTTGACTAAGCATACTTATCATATGCTGCTGAAGCAGCCTAGAGCGTTTTATTTGGCTGGGACTGAGATGAACTGGGCTGTGTTTTTGAGGGATGGGTATGATGGTAATGGGTTTTTGGTTGAGAAGGACCCTCAGGTGCTCTTTAATGAGAAGCTTTATAAGTATGCTCAGATGAATGAAATGCAACCTGGTTCTGATGTTGAAATGGAAGAACAACATTTAACTTAA 1200 0.485 MAWRFFFFSNIKSSKTLTIGNPNGAPFSTSFLITKTPKKYKKKRKPKNSPRTNPIQTQPNCIPELERIVERDALFRFVTRSKQFLSAQPEHVLRLDDAGKLHRELGFPRGRKLSRFLQQHPLLFQTYRHSDSKMWLGFTDLMEHLVAEEQSLMDSMELNRVDKVRKLLMMSARNRISLSKIHHCRTLFGIPDNFRDRVLKYPEFFRIVDENDGKRVLELVNWDPHLAVSALEREFMVDENAAKRKFRFPVKYGKDLDIGLDDSRKLNLLNTLPLVSPYSDGSKLDVWSLEAEKYRVGVIHEFLSLTLEKRASIHHLVEFKEEFSLTKHTYHMLLKQPRAFYLAGTEMNWAVFLRDGYDGNGFLVEKDPQVLFNEKLYKYAQMNEMQPGSDVEMEEQHLT* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0088 399 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 1 390 IPR045040 GO:0003723
Apr1g0088 399 MobiDBLite consensus disorder prediction 37 59 - -
Apr1g0088 399 Pfam Plant organelle RNA recognition domain 63 383 IPR021099 GO:0003723
Apr1g0088 399 PANTHER OS09G0473400 PROTEIN 1 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0088 Apr-Chr1 985902 987625 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0088 - - gmx:100813429 635.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0088 1 985902 987625 Apr1g0088 1 985902 987625 ECH