Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0087 ATGTCCAGGCCTCTGCACAGAGGGGTATCTGCGGTTCGGATCCCTGAGAATAACTACGATTCATGGGACTCCCAATCCAAAGATAAAACAGAAAAGGAAGGTTTGGATAGAAGAGGTTCCTCTGGTCACAGCTGCTCACCCTTGAGGTCTCCCTTTGGGTTGCTTTTTGCAGATAATTCTCATTCTAAATATGGCATAACCGAGAATGGTTTCTCATCTGATCCCTTCATTGTTGGCACTCCAAGAAGTAGGCATAAATTAGTTCTTTTTTTCTTGAAGTTTAGTTTAGTGTTTATAGTTATTCTTGCTCTTGCTGGGTCTTTTTGGTGGACAATCACAATTTCGACCACATCAAGAGGTCACATTTACCATGGTTATAGAAGACTACAGGAGAAGCTTGTATTGGACCTTTTGGATATTGGGGAGATTTCTTATGCTCCCACGAGGTTGAAAGAATTGGAATTCTGTTCTCAGGAGTTTGAAAATTATGTTCCTTGCTTCAATGTTTCTGACAATATAGCTCTGGGTTCTTCTGATGGCAATGAGTTTGACCGGCAATGTGGCCACGAGCACAGCCAAAATTGTTTAGTTCTCTCACCAACAAATTACAAAATTCCTCTTCAGTGGCCTACAGGAAGGGATATCATATGGCTTGCTAATGTTAAAATAACTGCACAGGAGGTTCTTTCTTCTGGAAGCTTGACCAAAAGGATGATGATGCTCGATGAGGAGCAAATTTCCTTTCGTTCAGCTTCTCTTATGTTTGATGGCGTTGAAGACTATTCACATCAAATAGCAGAAATGATTGGACTCAGAAATGAATCTAACTTCATACAGGCTGGGGTTAGAACCATACTGGATATTGGTTGTGGCTATGGTAGCTTTGGAGCGCACCTCTTTCAGAGTATGCTTTTAACTATGTGCATTGCAAACTATGAGCCTTCAGGCAGCCAAGTTCAGCTTACACTTGAGAGGGGTCTTCCTGCTATGGTTGCTTCTTTCACTTCAAAACAATTGCCATTCCCATCTCTTTCCTTTGAAATGCTGCATTGTGCGAGATGTGGCATTGATTGGGACCAAAAAGATGGCATTCTCTTGATTGAAGCTGATAGACTTTTAAAGCCGGGTGGCTACTTTGTCTGGACTTCACCGCTTACAAATGCTCGTGACAAAGGAAGTCAGAAAAGGTGGAAGTTCATACACGATTTTACTGAAAACCTTTGCTGGGATATGCTGTCACAGCAAGATGAAACTGTTGTATGGAAGAAAACTGGTAAAAGAAATTGTTATAGTTCAAGAAAGAATAGTTCTCCCCCTCCGTTATGTGGCAGAGGCTACGATGTGGAGTCTCCATATTATCGAGAACTGCAAAACTGCATAGGAGGTACACATAGCAGGCGTTGGATTTCAATTGAAGAGAGGGAAACCTGGCCTTCCAGAGATCACTTGAGCAAGAAGGAGCTTGCAATCTATGGGTTGCAATCTGATGAATTCACTGAGGACTCTGAAAGCTGGAGAGCAGCTGTCCGTAATTATTGGTCTCTTCTGTCCCCTTTAATATTTTCTGATCATCCAAAGAGACCTGGTGATGAAGACCCTCCACCACCTTACAACATGCTAAGAAATGTGCTAGACATGAATGCTCATTTGGGTGGTTTCAATTCTGCATTGTTGCAAGCTGGAAAATCTGTCTGGGTAATGAATGTGGTCCCTATAAGTGGACACAACTATCTACCCTTGATCCATGACAGAGGTTATGTTGGCGTCTTACATGATTGGTGTGAGGCCTTTCCAACATACCCTAGAACCTATGATTTGGTGCATGCAGCAGGACTTCTATCCCTTGAAGCTGCTCAGCAGCGCAGATGCTCAATGCTTGACATGTTCATTGAGATTGACAGGTTACTTCGCCCAGAGGGTTGGGTTATAATTCGTGACACAGTTCCTTTGATAGAGTCAGCTAGGGCTCTAACAACAAGGCTAAAGTGGGATGCGCGAGTCGTAGAAATTGCAAGTGACAGCGATCAGAGACTCCTGGTCTGCCAGAAACCTTTCTTTAAGAGATTGGCAAATTAA 2076 0.4287 MSRPLHRGVSAVRIPENNYDSWDSQSKDKTEKEGLDRRGSSGHSCSPLRSPFGLLFADNSHSKYGITENGFSSDPFIVGTPRSRHKLVLFFLKFSLVFIVILALAGSFWWTITISTTSRGHIYHGYRRLQEKLVLDLLDIGEISYAPTRLKELEFCSQEFENYVPCFNVSDNIALGSSDGNEFDRQCGHEHSQNCLVLSPTNYKIPLQWPTGRDIIWLANVKITAQEVLSSGSLTKRMMMLDEEQISFRSASLMFDGVEDYSHQIAEMIGLRNESNFIQAGVRTILDIGCGYGSFGAHLFQSMLLTMCIANYEPSGSQVQLTLERGLPAMVASFTSKQLPFPSLSFEMLHCARCGIDWDQKDGILLIEADRLLKPGGYFVWTSPLTNARDKGSQKRWKFIHDFTENLCWDMLSQQDETVVWKKTGKRNCYSSRKNSSPPPLCGRGYDVESPYYRELQNCIGGTHSRRWISIEERETWPSRDHLSKKELAIYGLQSDEFTEDSESWRAAVRNYWSLLSPLIFSDHPKRPGDEDPPPPYNMLRNVLDMNAHLGGFNSALLQAGKSVWVMNVVPISGHNYLPLIHDRGYVGVLHDWCEAFPTYPRTYDLVHAAGLLSLEAAQQRRCSMLDMFIEIDRLLRPEGWVIIRDTVPLIESARALTTRLKWDARVVEIASDSDQRLLVCQKPFFKRLAN* 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0087 691 Gene3D Vaccinia Virus protein VP39 245 425 IPR029063 -
Apr1g0087 691 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 499 650 IPR029063 -
Apr1g0087 691 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 162 683 IPR004159 GO:0008168
Apr1g0087 691 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 16 689 IPR004159 GO:0008168
Apr1g0087 691 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 272 430 IPR029063 -
Apr1g0087 691 MobiDBLite consensus disorder prediction 22 39 - -
Apr1g0087 691 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED 16 689 - -
Apr1g0087 691 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0087 Apr-Chr1 977617 984493 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0087 K23870 - gmx:100812530 1266.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0087 1 977617 984493 Apr1g0087 1 977617 984493 ECH