Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0085 ATGAATTCCTTGAGCATCGCAAAGAAGAAGCCTCATGCAGTTTGTATGCCATACCCAGCTCAAGGCCACATAACTCCAATGCTCAAACTAGCAAAACTTCTCAATTTCAGCGGGTTTCACATCACTTTCGTTAACACAGAATTTAACCATAAACGTCTTCTTAAATCCCGTGGTCCAGATTCCCTCAAAGGCTTCCCTTCCTTTCGCTTTGAAACCATCCCTGACGGTCTACCAGAGTCTGATGTTGATGCCACACAGGATACACCTACCTTGTGTGATTCCCTCAGAAAAACTTGCTTAACACCCTTTAAAAGCCTTCTTTCAGAACTCAACAATGCCACAGATGTTCCTCCTGTTACTTGCATAGTTTCTGATGGTGCCATGAGCTTCACCTTAGAGGCTGCCAAAGATCTAGGCATCGCAGAGGTCCTTTTTTGGACTGTAAGTGCTTGTGGCCTCATGTGTTACCTTCACTATAGTAAACTCGTCAAAATGGGCCTCACACCCTTCAAAGACTCGAGTTATATAACAAATGGGTATTTGGAGACTGCCATAGATTGGGTACCTGGCATCAAAGAAATTTTGTTGAGAGATTTCCCCAGCTTCATGAGAACCACAGACCCAGATGACATTATGCTGCAGGTTTTGCAGGAAGAGTGCGGGAGAGCTAAGCATGCTTCTGCAATCATTTTGAATACATTTGAAGCATTAGAGCGTGATGTTCTGGACGCATTTTCGTCAATTTTGCCTCCTGTGTACCCCATTGGTCCCTTAAATTTACTCTTGAATCATGTCACGGACGAGGACTTGAACACAATTGGATCGAACCTTTGGAAGGAAGATCGAGGGTGTTTGGAATGGCTTAACACCAATAAACCCAACTCTGTGGTTTACGTGAACTTTGGGAGCATCACAGTAATGACAAGTGAGCAATTGGTTGAGTTTGCATGGGGACTCGCCAACAGTGGCAAAACCTTTTTATGGATCATTAGACCAGATCTTGTGGTTAGTGAAAACGCACTTCTTCCTCATGAGTTTGTGTCTGAGACAAAGAATAGAGGTCTTATGTCAGGTTGGTGTCCTCAGGAGGAAGTACTAGCTCACCCTGCAATTGGAGGGTTCTTGACACACAGTGGTTGGAACTCAACCATTGAAAGTTTGTGTAATGGAGTGCCAATGATATGCTGGCCTTTCTTTGCTGAGCAACCAACTAATTGTAGATTCTGTTGTAAGGAATGGGGGGTTGGGTTGCAGATAGATGGTGATGTAAAGAGGGATAGAGTTGAGAGCCTTGTGAGGGAATTGATGGAGGGGCAGAAAGGGAAAGAGTTGACCAAGAAAGCCTTGGAATGGAAGAAACTGGCAGCAGATGCTGCTATTAACAAAACTGGGTCTTCATTTCTGAATTATGATAACATGGTTCGTCAAGTTCTTTTGAGAAGAACTTGA 1449 0.4382 MNSLSIAKKKPHAVCMPYPAQGHITPMLKLAKLLNFSGFHITFVNTEFNHKRLLKSRGPDSLKGFPSFRFETIPDGLPESDVDATQDTPTLCDSLRKTCLTPFKSLLSELNNATDVPPVTCIVSDGAMSFTLEAAKDLGIAEVLFWTVSACGLMCYLHYSKLVKMGLTPFKDSSYITNGYLETAIDWVPGIKEILLRDFPSFMRTTDPDDIMLQVLQEECGRAKHASAIILNTFEALERDVLDAFSSILPPVYPIGPLNLLLNHVTDEDLNTIGSNLWKEDRGCLEWLNTNKPNSVVYVNFGSITVMTSEQLVEFAWGLANSGKTFLWIIRPDLVVSENALLPHEFVSETKNRGLMSGWCPQEEVLAHPAIGGFLTHSGWNSTIESLCNGVPMICWPFFAEQPTNCRFCCKEWGVGLQIDGDVKRDRVESLVRELMEGQKGKELTKKALEWKKLAADAAINKTGSSFLNYDNMVRQVLLRRT* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0085 482 Gene3D Glycogen Phosphorylase B; 279 457 - -
Apr1g0085 482 Gene3D Glycogen Phosphorylase B; 12 464 - -
Apr1g0085 482 CDD GT1_Gtf-like 11 462 IPR002213 GO:0008194
Apr1g0085 482 PANTHER GLYCOSYLTRANSFERASE 56 477 - -
Apr1g0085 482 PANTHER GLYCOSYLTRANSFERASE 7 57 - -
Apr1g0085 482 ProSitePatterns UDP-glycosyltransferases signature. 359 402 IPR035595 -
Apr1g0085 482 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 7 57 - -
Apr1g0085 482 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 56 477 - -
Apr1g0085 482 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 10 474 - -
Apr1g0085 482 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 67 443 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0085 Apr-Chr1 946177 947720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0085 9 479 Glycosyltransferase AT1G22340 61.181 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0085 - - gmx:100795180 845.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0085 1 946177 947720 Apr1g0085 1 946177 947720 ECH