Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0071 ATGTTTCGGGGGATGAGCGTTGAGGCACCCATGAATTGGTTTTTGCGTTTAAAACCAAACAATAGAAATAAAGTGCGGCCGGCACACACTCGCAGCCGCCAAGGATATTATAGTACTATTTCAAACGCGATGGCGCTTAGTTTTGAGGTTCTTGGCAGGTTCAACCGTGCACGTGCCGCTCGATTGACACTCCCTCATTTTGTGTGCCAAACACCTTTGTTTATGCCTGTGGGCACACAAGGAACAATCAAGGGGCTGACAACTAGCCAGCTTGAGGATATTGGTTGCCAGATAATACTTGGAAATACATATCACTTAGCCCTTCGACCTACTTCTGAGCTTCTTGATGAAGTTGGTGGTCTTCATGATTTTATGAATTGGCCACGGGCTCTGCTTACGGACTCTGGTGGCTTTCAAATGGTTTCGTTGTTGCATCTTGCTGATATCACAGAAAAAGGAGTGACATTTCAGTCACCAGTAGATGGAAAACCAATGCTTCTAACACCTGAGGAATCAATTCAAATCCAAAATAGAATTGGAGCAGATATTATTATGGCTCTTGACGATGTTGTAAAGACCACCATTACTGGTCCACGAGTTGAGGAAGCTATGTATAGAACACTTAGATGGATAGACAGATGCATAGAAGCTCACAAGAGACCTCATGATCAGAACTTGTTTGGTATTGTGCAAGGTGGTTTAGATCCTGTATTGAGGGATATTTGTGTCAAAGGTATGGTGGAGCGCAATTTGCCTGGCTATGCTATTGGTGGTCTTTCAGGCGGTGAAGATAAAAATTCATTTTGGCGAGTTGTTGCTCAGTGCACTGCTTCTTTGCCAGAGGATAAACCCCGATATGTCATGGGAGTTGGTTATCCACTTGATATTGTTGTTTGTAGTGCTTTGGGTGCTGACATGTATGACTGTGTTTATCCTACCCGTACAGCACGCTTTGGCACTGCTCTTGTTCCTGAGGGAGTATTGAAACTAAAACACAGAGTAATGGCTGAGGACACCCGTCCAATTGATCCTACTTGCTCTTGTATGGTTTGCAAGAACTACACCAGGGCATACATCCATTGCCTTGTAACAAAAGATGCCATGGGGTCTCAGCTTTTGTCATATCATAATTTATACTACATGATGCAGCTCAGTAGGAATCTACACTCTTCCATAGTTGAAGGAAGGTTCCCAGAGTTTGTATGCGACTTTCTACACAAAATGTTCCCAAAAGGTGATGTTCCTGAATGGGTCAGCAATGCCATGGAGGTAGCTGGAATCGACATCTCTTCCTGCTGTGCTCCATTTTCATCAAGCCAAGAACATGATTCCAAAAATATGTCAGAAGAATTTAATTTAATGAGGTAA 1368 0.4327 MFRGMSVEAPMNWFLRLKPNNRNKVRPAHTRSRQGYYSTISNAMALSFEVLGRFNRARAARLTLPHFVCQTPLFMPVGTQGTIKGLTTSQLEDIGCQIILGNTYHLALRPTSELLDEVGGLHDFMNWPRALLTDSGGFQMVSLLHLADITEKGVTFQSPVDGKPMLLTPEESIQIQNRIGADIIMALDDVVKTTITGPRVEEAMYRTLRWIDRCIEAHKRPHDQNLFGIVQGGLDPVLRDICVKGMVERNLPGYAIGGLSGGEDKNSFWRVVAQCTASLPEDKPRYVMGVGYPLDIVVCSALGADMYDCVYPTRTARFGTALVPEGVLKLKHRVMAEDTRPIDPTCSCMVCKNYTRAYIHCLVTKDAMGSQLLSYHNLYYMMQLSRNLHSSIVEGRFPEFVCDFLHKMFPKGDVPEWVSNAMEVAGIDISSCCAPFSSSQEHDSKNMSEEFNLMR* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0071 455 Pfam Queuine tRNA-ribosyltransferase 56 408 IPR002616 GO:0006400|GO:0016763
Apr1g0071 455 PANTHER QUEUINE TRNA-RIBOSYLTRANSFERASE CATALYTIC SUBUNIT 1 42 432 - -
Apr1g0071 455 SUPERFAMILY tRNA-guanine transglycosylase 44 407 IPR036511 GO:0006400|GO:0016763
Apr1g0071 455 TIGRFAM Q_tRNA_tgt: tRNA-guanine transglycosylase 48 408 IPR004803 GO:0008479|GO:0101030
Apr1g0071 455 TIGRFAM tgt_general: tRNA-guanine family transglycosylase 48 408 IPR002616 GO:0006400|GO:0016763
Apr1g0071 455 Hamap Queuine tRNA-ribosyltransferase [tgt]. 46 407 IPR004803 GO:0008479|GO:0101030
Apr1g0071 455 Gene3D - 43 410 IPR036511 GO:0006400|GO:0016763
Apr1g0071 455 MobiDBLite consensus disorder prediction 436 455 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0071 K00777 - gmx:100819664 852.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0071 1 827116 842142 Apr1g0071 1 827116 842142 ECH