Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2381 ATGCAGGCTCTGCGGCTGAGGCTTTCCAGTTCCGAGGCCAGGCCTCTTTTCAGACTTAGATCCTATTTATTATATTCTTCTTCTTGTTGCTCTGCGGCACTATTGAATTTGAACTCACTACCATCACCCCCTTCTGCTTCCTCCATGTCTACCAACTTGTTCACCTTTCCGTGGTCTGCCTTTCAATGCCGGGGAATCAAAGTCTCTGGTTCTGATATTAGAGTCGGAAACATCATTGGAAAACAAGGGCGCATTTACGAGGTTCTTAAAGTAGATCACTCTCACGAAGGAAGAGGAAAAGCCACAATCAAGGTGGAACTTCGTGACATTGGCCAGGGAAACAAGGTAACACAACGGATGGGCACTGATGAGGATATTGAAAGGGTCTTTGTTCGAGAAAGGACTTTCATGTTCATGTGCATGGATCATGATGGAACAGTAGTATTGATGGACCCTGATACATTGGATCAAATGGAAGTTTCCAAAGACTTGTTCGGCAAGAATTGTTTATACCTACAAGATGAAATGAAGGTGAAAGTACAATTTTATGATGACAAACCTTTATCTGCATCTGTTCCAAAACGTGTAACATGTAATGTCAAGGAGGGAATTGCTGCCACTCCAAGGAACAAAAAGGTTGTACTAGACAATGGCCTTTCAGTTGAAGTTCCACCTCACATTGTAGCTGGTGATGCCATTGTTGTTAATACAGAGGATGACTCCTACATAGAAAGGGCCAAGGCATAG 747 0.4324 MQALRLRLSSSEARPLFRLRSYLLYSSSCCSAALLNLNSLPSPPSASSMSTNLFTFPWSAFQCRGIKVSGSDIRVGNIIGKQGRIYEVLKVDHSHEGRGKATIKVELRDIGQGNKVTQRMGTDEDIERVFVRERTFMFMCMDHDGTVVLMDPDTLDQMEVSKDLFGKNCLYLQDEMKVKVQFYDDKPLSASVPKRVTCNVKEGIAATPRNKKVVLDNGLSVEVPPHIVAGDAIVVNTEDDSYIERAKA* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2381 248 Gene3D - 130 193 IPR012340 -
Apr10g2381 248 SUPERFAMILY Nucleic acid-binding proteins 200 246 IPR012340 -
Apr10g2381 248 SMART Elong_fact_P_C_2 196 245 IPR015365 GO:0005737|GO:0043043
Apr10g2381 248 Pfam Elongation factor P (EF-P) OB domain 144 188 IPR001059 GO:0003746|GO:0006414
Apr10g2381 248 SMART EFP_2 133 188 IPR001059 GO:0003746|GO:0006414
Apr10g2381 248 ProSitePatterns Elongation factor P signature. 211 230 IPR013852 -
Apr10g2381 248 Pfam Elongation factor P (EF-P) KOW-like domain 70 125 IPR013185 -
Apr10g2381 248 PANTHER ELONGATION FACTOR P 19 246 IPR020599 -
Apr10g2381 248 Pfam Elongation factor P, C-terminal 203 245 IPR015365 GO:0005737|GO:0043043
Apr10g2381 248 PANTHER ELONGATION FACTOR P (EF-P) FAMILY PROTEIN 19 246 - -
Apr10g2381 248 SUPERFAMILY Nucleic acid-binding proteins 132 193 IPR012340 -
Apr10g2381 248 SUPERFAMILY Translation proteins SH3-like domain 69 129 IPR008991 -
Apr10g2381 248 Gene3D - 68 128 IPR014722 -
Apr10g2381 248 Gene3D - 196 248 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2381 Apr-Chr10 35571719 35591070 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2381 - - gmx:100805422 362.073