Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2380 ATGTGGACAAATGTTTTCAAAATCGGAAGTCTGCATCAGATATCATGGTTTCAGTTTCTCCCTCATGAGCCTGACCTGAACCCTCTACCTGACAAAAGTGTAAAAGTAGATCACAAGGATGCTGCAATGTTACTGGTACTTTCATCACATCTGCAACTTCAGAAGGAAGGATTTCTCAGCACGTGGACCAATTCCTTTGTTGGACCCTGGGATCCATCCCAGGGTTTGCATAATCCTGATGAAAAAATTAAGCTGTGGCTTTTTCTTCCGGGGCGTCATTCATCAGTTGTTGAGAATGCTCAGCCAGCAGTATCCGGATTAAGAGTTGTTGCTTCTGGGATCTGGTTGGCTCCTGGTGATTCAGAAGAGGTTGCATTTGCTCTCTCTCAGGCTTTGAGGAATTGTATAGAAAGAGCACTGCATGGGCTTTATTACATGAGATTTGGAGATGTATTTTCAAAGTTTCATCAATTTCAAAGTGAAGAACTATCAAGAAGAGGACAGCCTGCAGTGGAGTTTGTCTTTGCTGCAACTGAGGAGGCAATCTTCATACATGTTATAGTGTCCTCAAAGCATATCCGGACACTTTCCACAGGTGATCTGGAAAAAGTATTAAAACGTTCTATGGAGGCGACATATAGACTTCCAGTTATTGTTTCTCCTCATGGGATGCGGGGCAGCTTGATTGGTTGTTCTCCAAGTGATCTTGTCAAGCAAAGCTATTTCAGTTCTACCAAATTTAGGGTGTCAAATGGAATTATAGGTCTCCCGTATCATGTTTCCCAGGGTGTTGGTTGCCAGCTGAGGGGGCAGAATTGTTATGTTGAAGTAAGTCTTGGCTTCCCTAGATCTGGAACTGAAAAGGCATTGCAGCCAAACAAAAATAGTGTCAGGAATTTACCCAAACTTCATGTTGCTGAATCTCCTATTGTGGGACGTAGTGATCACAAGGGATCACCAGATTATATGTCCGATTATGAGAAAACATTTCTCTATCCAGCTGAGGCAGTTCTTGTACCAGTTTTACAAACATCACTAGCGAGGTCTTCTTTGAGAAGTGCTGGTGATGCGGATTGTTCTGAAGATCCTTGGACTGAAAGCAATGGAGCCCGCACGCAAAATAGTTATGATAGTAGTAGCAATAGCAACAGTAGCAGTATTAGTAGCTTAAGTGCCAGCTCTAGTGATAGTGATTACAAAAATACAGGACCAAGTGAACTAGAGGCAGATGCTGATTCTTTAACTTGCAGACAGTCTATGGTATCTTCTGGTGATCAGTTGGAAAGTGATGGCCCCAAATTGGGCTCTAAACGATCTCGAACTGGGGTGACAGAATCATTAACCATTACAGGAGTAGGAAATGAGCCAATTGGATCTTACTGGGACTGGGATGATGATGATAGGGGAATGGAAATGGATATTCAAGCTCTTCTATCTGAGTTTGGTGATTTTGGTGACTTTTTTGAAAATGATGTTTTACCATTTGGAGAGCCCCCAGGAACTGCAGAATCTCAGGCACTTATATTTTCTGCCCCAGATTGTGGAGATGTCAACAGCAGTCCAGTTGGTGTGATGGACGTTTCAGATCAAATGCTTTTGTCTGTCGGGTTTCCTTCCTTTGAGAGCTTTAACCCTCCTCCTCCAGCAGCCATGGAGGAATGTCTTAACAAAAGCCAAGATAACTTGAATAGCTCCATGTCTTTGGGTCCAACCAATCAAACTCAAGTGTTGTATACAAGGGAGTTTGATCATATAATGAAGGCTGAAGCAATGATGACATTTGCTCCTGAATTTGGAGCTGTTGAGACCCCTACTTGTGAGTTGTCCCCAACATTATTCAGAAGCCCATATTTTCCCAAGTCTCGAAAAACAGAAAGTTCATATTCAAGTTCAAACAATTACTTATATGGTGCTGCACCACCCACTTCTCCCTGCACTGGAGGATCAGAGGGGAAGAATGGAATTGCTGTCAATACAATAACATGTTCTGGAAAACACGATGCAAGTATGACTCTCCACTCAAAAAATTATTATACTTTTGTGGAGAGTAGGAAAGACAAAAATGATAAAAAACCCATCACTGGTAATGATAACAGCCTTGCTAAATCTGAGGAGATAGTACTACCTCCTCTCTCAAACATTGGTTCTAATGCTATTGTCAAGTCTGCCTTAAGGAAGACGACTGAAGGCACACATGAAGCAGAGCAATTACTTCTATCTGCAAAAACTTTGTTAGCAACTGATGTCACATGTGTTATGTTCCAAGCTTCCATGTGCAGGTTACGTCACATTCTCTTGTCTTCAAGTAACCTAGTGCCTGTTGGTTTGAGTAGATCAACAGGGGCTACACTTTTGAATCAGCTTCCTGGTGATCCGGGTACAACCACAGACAACATATCTAGCAAGTATGATGTGAAGAAGAAAGAAAATATACCGGTTAGAATTGCAGGTGATATTGATGGGGGAATGCTTGATGGGCACCTTAATGCACCTGTTGGTGTTTGGCGCACTGTAGGAGCTTCAAAAGTTGTAAAACCTTCAAATTCACCTAACATGGAAGTTGGTCCTTCCTTTTCTCATAATTCTTTCAATGAAGAAGGCATCCTTTCCTACAGTCAAAGGAAACCACTTCAGGAGCTTCTTGACGGGATTTCATTGCTTGTCCAACAAGCTATTTCCTTTGTTGATCTGGCCTTGGATGGGGATTGTGGTGATGGTCCTTATGGTTTGCTTGCGTTGCAAGAACAGTGGAGGCGTGGATTTTGTTGTGGGCCTTCCATGGTCCATGCTGGTTGTGGGGGAACTCTTGCCTCTTCTCATTCACTGGACATTGCTGGCTTGGAGTTAGTGGATCCACTTTCTGCTGATGTTCATGCATCTACTGTAATCAGTTTGCTGCAGTCTGACATAAAGACAGCTTTGAAATCTGCGTTTACCAATTTGGAAGGGCCATTATCTGTGACTGATTGGTGCAAAGGACGCAATCAATTGGTTGATACTGGAAGCATAATTGATGGAGTTTCTGCTGAATCCAGTATTAATGAATGTAGAGATTCTTCGGAACCAATGAGCCCATCCCAGTCATCTGTTGGCGGATCATCCAGTAATAAGGTTTCCAGCATGATGGATGGTGCTAAGGTGGATGAGACTCAAAGGAGATCTGGTCAAGATATGTGCAGTTCAGATTCAGAGCAGCAGCCCTGTTCCCGGCTAAAACCTACTCTCATTGCTCTTCCGTTTCCTTCTTTACTTGTAGGGTATCAGGATGATTGGCTTAAGACATCAGCAAACTCTCTACAGTATTGGGAAAAGGCTCCTCTAGAACCCTATGCTCTGCAGAAACCTATTACATATCATGTTGTATGTCCTGACATTGATCCCCTTACATCTGCTGCTGCTGATTTTTTTCAACAACTAGGAACAGTGTATGAAACATGCAAGCTTGGTACCCATTCACCTCAAGGCTTGGGGAATCAGATGGATGTAGAGTCCACAAAGTTGTCATCTTGTGGTTTTGTTTTACTTGATTGCCCCCAATCAATGAAGATTGAGAGCAGCAATGCATCTCTTGTTGGTTCAGTAAGTGATTATTTTTTATCTTTATCTAATGGTTGGGACCTGACTAGTTATCTCAAGTCTCTTTCGAAGGCGCTTAGAGCTTTGAAAATTGGCTCTTGCTTTTCTACAAACCCTGGTGAAGGAAGTAACAGTTCATGCTTGGTAATTTATGTGGTGTGCCCGTTTCCTGATCCCACTGCAATTTTGCAAACTGTAATTGAATCTTCTGTTGCCATTGGGTCGGTTATCCAGAAGTCAGATAGAGAGAGGAGATCTAGCTTGCATAGTCAAGTTGTGAAGGCTTTAAGTGGCTTGGCAACTGTTGATGAAGCTTCAGCGTCTAATATCCTTGTGCTTTCGGGGTTTAGTATTGCGAAATTGGTCTTGCAGATAGTTACAGTTGATGCCATTTTCAGAGTCACAAGCCCATCAGTTAGTGAGCTTGTCATTTTAAAAGAGACTGCCTTTACTGTATACAGCAAGACTCGTCGTATTTCACGTGGAATCTCTAGTGATTTTGCTCAAACAGCTTTTTGTAGTAGATCTCATTCTGTTTTGACACAAATGCCTTCTCCCATCTCTGGTATGTGGAAAGACTGTGTTGGTCCTCGAATGGCAGGACATTCTCTTCCTAGAGAGGGTGACATTGATGCTAGCTTGAGGCCTGGTACTTGGGATAATGCTTGGCAGCCAGCGAGAACTGGGGGGTTAACCTGTGATCCAAGTAGAAGTGGGGATAATTTTCTTCACGATGAAATCCGTTACATGTTTGAACCCCTTTTTATTCTTGCAGAACCTGGTTCTCTTGAAAATGGTATTTCAGTTATTGGTAGCCCCACTTCTGAAGCTTCCAAGGCATTGGCTGATGACAATAGTGGTACCTATGTGCAGAGTATGAGTACAGCAGGAAGTGCGGAGTCTGCTTCAAGCACTGATGGAACTGGGCCTGATCAGAAGTCTCCTCCAAGCCTACATTGTTGCTATGGATGGACAGAGGATTGGCGTTGGCTTGTGTGCATCTGGACAGATTCAAGGGTTCTTCAGCAGGGTTGTCTGATTCTTCAATCTTGTGATCCTGGCCTTGCAAAGCCTCGAGATTTTGTGATAGCACGCATTGGAGGTTTCTATGAGCTTGAGTACCTTGAGTGGCAGAAAGCCATTTATTCAGTTGGTGTATCTGAGATGAAGAGGTGGCCCCTGCAATTGCGGAAATCTATGTCTGATGGAATGTCTGCAACTAGTAATGGTTCTTCTTTGCAACAACCAGATATGAGTTTGATCCCAGAAAGAACACTTCCTTCCTCTCCTAGTCCTTTGTACAGCCCTCATACCAAACCCACTGGTTTTATGAAAGGCAGTTTAGGGCAACCTGCAGCAAGAAAGCAGCTTATGGGTGGACATTCTATGGTTGACAATTCAAGGGGTTTGCTTCATTGGGCACAAAGCATTAGTTTTGTTGCAGTTTCCATGGACCATACCTTACAGCTAGTTCTGCCAGCTGATTCATCTACTCTTGAAACTGATGGTGGTGGAATTTCTATTTTAGGTTACATAGAAGGTTTCACTCCAGTGAAGTCTCTTGGTTCTACTTCTTCCGCATATATTCTAATTCCTTCTCCCAGTATGCGGTTCCTTCCTCCAACAGTTCTTCAACTCCCCACATGCCTCACTGCAGAGTCGCCACCACTAGCCCATCTGCTTCACAGTAAAGGTTCTGCTCTTCCGCTGTCCACTGGATTTGTGGTTTCAAAAGCAGTGCCTTCCATGAGGAAGGACTATAGAAGCAACCTGAAAGAGGAATGGCCTTCCGTACTTTCAGTGAGTCTCATTGATTATTATGGAGGTACCAACATCCCCCAAGAGAAGATTATTCGAGGAATTAACAAGCAAGGTGGTAGAAGTTTAAGCTGGGAAGCTAAAGATTTTGAAATTGAGACCCACTTGGTTCTAGAGTCTCTTGCAGCAGAGCTTCATGCTTTGTCATGGATGACCGTGAGCCCCACATACTTGGAGAGACGAACAGCACTTCCTTTTCACTGTGACATGGTTCTAAGACTAAGAAGACTTCTTCACTTCGCTGATAGAGAGCTCTTCAAGCAGTCAGATAAATCCTAA 5673 0.4322 MWTNVFKIGSLHQISWFQFLPHEPDLNPLPDKSVKVDHKDAAMLLVLSSHLQLQKEGFLSTWTNSFVGPWDPSQGLHNPDEKIKLWLFLPGRHSSVVENAQPAVSGLRVVASGIWLAPGDSEEVAFALSQALRNCIERALHGLYYMRFGDVFSKFHQFQSEELSRRGQPAVEFVFAATEEAIFIHVIVSSKHIRTLSTGDLEKVLKRSMEATYRLPVIVSPHGMRGSLIGCSPSDLVKQSYFSSTKFRVSNGIIGLPYHVSQGVGCQLRGQNCYVEVSLGFPRSGTEKALQPNKNSVRNLPKLHVAESPIVGRSDHKGSPDYMSDYEKTFLYPAEAVLVPVLQTSLARSSLRSAGDADCSEDPWTESNGARTQNSYDSSSNSNSSSISSLSASSSDSDYKNTGPSELEADADSLTCRQSMVSSGDQLESDGPKLGSKRSRTGVTESLTITGVGNEPIGSYWDWDDDDRGMEMDIQALLSEFGDFGDFFENDVLPFGEPPGTAESQALIFSAPDCGDVNSSPVGVMDVSDQMLLSVGFPSFESFNPPPPAAMEECLNKSQDNLNSSMSLGPTNQTQVLYTREFDHIMKAEAMMTFAPEFGAVETPTCELSPTLFRSPYFPKSRKTESSYSSSNNYLYGAAPPTSPCTGGSEGKNGIAVNTITCSGKHDASMTLHSKNYYTFVESRKDKNDKKPITGNDNSLAKSEEIVLPPLSNIGSNAIVKSALRKTTEGTHEAEQLLLSAKTLLATDVTCVMFQASMCRLRHILLSSSNLVPVGLSRSTGATLLNQLPGDPGTTTDNISSKYDVKKKENIPVRIAGDIDGGMLDGHLNAPVGVWRTVGASKVVKPSNSPNMEVGPSFSHNSFNEEGILSYSQRKPLQELLDGISLLVQQAISFVDLALDGDCGDGPYGLLALQEQWRRGFCCGPSMVHAGCGGTLASSHSLDIAGLELVDPLSADVHASTVISLLQSDIKTALKSAFTNLEGPLSVTDWCKGRNQLVDTGSIIDGVSAESSINECRDSSEPMSPSQSSVGGSSSNKVSSMMDGAKVDETQRRSGQDMCSSDSEQQPCSRLKPTLIALPFPSLLVGYQDDWLKTSANSLQYWEKAPLEPYALQKPITYHVVCPDIDPLTSAAADFFQQLGTVYETCKLGTHSPQGLGNQMDVESTKLSSCGFVLLDCPQSMKIESSNASLVGSVSDYFLSLSNGWDLTSYLKSLSKALRALKIGSCFSTNPGEGSNSSCLVIYVVCPFPDPTAILQTVIESSVAIGSVIQKSDRERRSSLHSQVVKALSGLATVDEASASNILVLSGFSIAKLVLQIVTVDAIFRVTSPSVSELVILKETAFTVYSKTRRISRGISSDFAQTAFCSRSHSVLTQMPSPISGMWKDCVGPRMAGHSLPREGDIDASLRPGTWDNAWQPARTGGLTCDPSRSGDNFLHDEIRYMFEPLFILAEPGSLENGISVIGSPTSEASKALADDNSGTYVQSMSTAGSAESASSTDGTGPDQKSPPSLHCCYGWTEDWRWLVCIWTDSRVLQQGCLILQSCDPGLAKPRDFVIARIGGFYELEYLEWQKAIYSVGVSEMKRWPLQLRKSMSDGMSATSNGSSLQQPDMSLIPERTLPSSPSPLYSPHTKPTGFMKGSLGQPAARKQLMGGHSMVDNSRGLLHWAQSISFVAVSMDHTLQLVLPADSSTLETDGGGISILGYIEGFTPVKSLGSTSSAYILIPSPSMRFLPPTVLQLPTCLTAESPPLAHLLHSKGSALPLSTGFVVSKAVPSMRKDYRSNLKEEWPSVLSVSLIDYYGGTNIPQEKIIRGINKQGGRSLSWEAKDFEIETHLVLESLAAELHALSWMTVSPTYLERRTALPFHCDMVLRLRRLLHFADRELFKQSDKS* 1891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2380 1890 Pfam MID domain of medPIWI 1114 1229 IPR041285 -
Apr10g2380 1890 Pfam MID domain of medPIWI 1224 1350 IPR041285 -
Apr10g2380 1890 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 13 1 1531 - -
Apr10g2380 1890 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 13 1534 1883 - -
Apr10g2380 1890 Pfam Mediator complex subunit 13 N-terminal 2 340 IPR021643 -
Apr10g2380 1890 MobiDBLite consensus disorder prediction 1483 1508 - -
Apr10g2380 1890 MobiDBLite consensus disorder prediction 1014 1043 - -
Apr10g2380 1890 MobiDBLite consensus disorder prediction 1014 1041 - -
Apr10g2380 1890 MobiDBLite consensus disorder prediction 1483 1504 - -
Apr10g2380 1890 MobiDBLite consensus disorder prediction 365 402 - -
Apr10g2380 1890 PANTHER RAG1-ACTIVATING PROTEIN 1 1534 1883 - -
Apr10g2380 1890 PANTHER RAG1-ACTIVATING PROTEIN 1 1 1531 - -
Apr10g2380 1890 MobiDBLite consensus disorder prediction 352 442 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2380 K15164 - gmx:100782017 3252.61