Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2378 ATGGGTGGCAGGGTGATGTTGGCATTGATGCTATGCCTCTTGGCAGGAGCAGTAAGGGGTGAAGATCCGTACGTGTACTACACATGGAACGTCACTTATGGCACCATTTCTCCTCTTGGAGTACCCCAGCAGGGTATTCTTATTAACGGACAGTTCCCGGGTCCAGAAATAAACTGCACAAGCAACAACAACATAGTGGTTAATGTGTTTAACAACCTCGACGAGCCATTCCTATTGACCTGGCACGGGATTCAACAAAGGAAGAACTCGTGGCAAGAGGGTACCCTGGGAACCACATGCCCCATAGCACCAGGGACAAACTACACCTACCACTTCCAAGTGAAGGACCAGATTGGAACATACTTCTACTATCCAACAACAGGAATGCACAGAGCAGCTGGTGGAATCGGTGGGCTTAGGATCTATAGCCGTCTGTTGATCCCTGTACCTTATGCCGATCCAGAGGATGAGTACTGGGTTCTCATGGGTGACTGGTACAGCAAGACCCACACCATGCTCAAGAAGTTCTTGGATAGCGGTCGCTCTATTGGCAGACCAGATGGTGTCCACATCAATGGCAAAACAGCCAAGGGCGATGGCAGTGATGAACCCCTCTACACCATGACCCCTGGCAAGACCTACAAGTACAGAATCTGCAACGTTGGTCTCAAGGATGCCCTCAACTTCAGGATCCAAGGTCATCCCATGAAACTTGTCGAGATGGAAGGCTCCCACGTCGTCCAAAACACCTACGACTCTCTCGACGTTCATGTTGGTCAATGCCTTTCTGTCCTTGTCACCGCCGACAAGGAACCAAAGGACTATTACATGGTCGCCTCCACTCGCTTCACCAAATACCTTCTCACCGGTAAAGGCATCATCCGTTACGCCAATGCCGTTGCCCCTGCCTCTCCCGAGCTTCCCCCCGCACCTGTTGGTTGGGCCTGGTCTCTCAACCAGTTCCGCTCCTTCCGTTGGAACCTCACCGCTAGTGCTGCAAGGCCTAATCCTCAGGGTTCTTACCATTATGGTCAGATCAACATCACTCGCACTATCAAGCTTGCCAACTCTGTCAGCAGAAGTCAAGGTCTTCGCTATGCCCTCAATGCTGTCTCACACGTCGATACTGAAACCCCTCTCAAGCTTGCCGAGTACTATGGCGTTGCTGACAAGGTTTTCAAGTACGACACCATCTCTGATGAACCCCCCGCCGATCTAAACACCGTCGTCAAAGCACCCAATGTCATCAATGCCACATTCCGCAACTTCGTCGAGATCATCTTCGAGAACCACGGAAAAGTCGTTCAGTCATACAATTTGGATGGTTACTCATTCTTTGCGGTCGCCATAGAGCCAGGCAGGTGGAGCCCAGAGAAAAGGAAGAACTATAACCTTCTGGATGCCGTGAGCAGACACACCATTCAAGTCTTCCCCAAATCATGGGCCGCCATTATGTTGACCTTCGACAATGCTGGAATGTGGAACCTGAGATCGGAGCATGCTGAGAATCGGTACCTGGGCCAACAACTCTACGTTAGCGTTTTGTCCCCTGAACGCTCCCTCAGGGATGAGTACAACATGCCAGATACCCAGCTTCTTTGCGGCATCGTCAAGGATTTGCCCAACCCACAGCCATACTCCATCTAG 1647 0.5118 MGGRVMLALMLCLLAGAVRGEDPYVYYTWNVTYGTISPLGVPQQGILINGQFPGPEINCTSNNNIVVNVFNNLDEPFLLTWHGIQQRKNSWQEGTLGTTCPIAPGTNYTYHFQVKDQIGTYFYYPTTGMHRAAGGIGGLRIYSRLLIPVPYADPEDEYWVLMGDWYSKTHTMLKKFLDSGRSIGRPDGVHINGKTAKGDGSDEPLYTMTPGKTYKYRICNVGLKDALNFRIQGHPMKLVEMEGSHVVQNTYDSLDVHVGQCLSVLVTADKEPKDYYMVASTRFTKYLLTGKGIIRYANAVAPASPELPPAPVGWAWSLNQFRSFRWNLTASAARPNPQGSYHYGQINITRTIKLANSVSRSQGLRYALNAVSHVDTETPLKLAEYYGVADKVFKYDTISDEPPADLNTVVKAPNVINATFRNFVEIIFENHGKVVQSYNLDGYSFFAVAIEPGRWSPEKRKNYNLLDAVSRHTIQVFPKSWAAIMLTFDNAGMWNLRSEHAENRYLGQQLYVSVLSPERSLRDEYNMPDTQLLCGIVKDLPNPQPYSI* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2378 548 Pfam Multicopper oxidase 157 298 IPR001117 -
Apr10g2378 548 Gene3D - 154 334 IPR008972 -
Apr10g2378 548 Gene3D - 344 539 IPR008972 -
Apr10g2378 548 SUPERFAMILY Cupredoxins 153 335 IPR008972 -
Apr10g2378 548 SUPERFAMILY Cupredoxins 21 171 IPR008972 -
Apr10g2378 548 PANTHER MULTI-COPPER OXIDASE 4 539 IPR045087 -
Apr10g2378 548 SUPERFAMILY Cupredoxins 347 534 IPR008972 -
Apr10g2378 548 Pfam Multicopper oxidase 391 517 IPR011706 GO:0005507|GO:0016491
Apr10g2378 548 PANTHER L-ASCORBATE OXIDASE-LIKE PROTEIN 4 539 - -
Apr10g2378 548 Pfam Multicopper oxidase 30 144 IPR011707 GO:0005507
Apr10g2378 548 Gene3D - 24 145 IPR008972 -
Apr10g2378 548 CDD CuRO_2_AAO_like_1 156 296 IPR034271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2378 Apr-Chr10 35524082 35525819 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2378 K00423 - gmx:100812197 934.48