Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2369 ATGGTTTCGAAAAGCAAAAGGGTGACGGATCTTGCACTCTCATCCACCATAGTAGTAGTGGTGTTACTGGTTGGTGTTGCAAGATCAGATTTAGCCAAAGACAGAGAAGAATGTGCTGACAAACTAATTGGGTTAGCTAGCTGTGTTCCGTACGTTGGTGGTGAAGCCAAAGCCCCCACCATAGACTGCTGCAGTGGCCTCAAAGTGGTACTTGACAAGAGCAGGAAATGCATCTGCATCCTCATCAAAGATCGTGACGACCCCAACCTCGGCATAAAGATCAATGCCTCTCTTGCTATCCAACTTCCATCTGCTTGCCACGCACCTGCTAATATATCTCAGTGCGTAGATCTTTTGCATTTGCCTCCCAACTCTCCCGAAGCCAAGGTGTTTGAAGGGTTCGAAAAATCCACCAAAACAAACACTTCAGCAGTTTCCAGCGGTGATGCTGAGAAGGGATCAAGCTCAAGTGCTCAGCAAAAGAGTGGTGGTATGTCCACAAACAGGTGGCTGGTGGTTGAGCTGGTTTGCTCTATTTTACCGTTCGTCTTCATCTTCGCTTGA 564 0.4752 MVSKSKRVTDLALSSTIVVVVLLVGVARSDLAKDREECADKLIGLASCVPYVGGEAKAPTIDCCSGLKVVLDKSRKCICILIKDRDDPNLGIKINASLAIQLPSACHAPANISQCVDLLHLPPNSPEAKVFEGFEKSTKTNTSAVSSGDAEKGSSSSAQQKSGGMSTNRWLVVELVCSILPFVFIFA* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2369 187 Gene3D - 35 115 IPR036312 -
Apr10g2369 187 Pfam Probable lipid transfer 20 115 IPR016140 -
Apr10g2369 187 PANTHER PROTEASE INHIBITOR/SEED STORAGE/LTP FAMILY PROTEIN 13 185 - -
Apr10g2369 187 SMART aai_6 38 115 IPR016140 -
Apr10g2369 187 MobiDBLite consensus disorder prediction 141 163 - -
Apr10g2369 187 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 13 185 IPR043325 -
Apr10g2369 187 CDD AAI_LTSS 45 107 - -
Apr10g2369 187 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 37 116 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2369 Apr-Chr10 35476345 35477206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g2369 16 186 Acyl Lipid Metabolism Gene Families AT1G55260 50.581 1.76e-57 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2369 - - pvu:PHAVU_001G268300g 267.314