Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2368 ATGGTACTGAATAAGAGAATGAGTACAGAGTTTGATTCAACGTCGGCTCCTGAACCTCACAAAATGTCTGGAGCTTCATCTGCAGCAACTACTAGTGGCCAAAAGCTCTCTATATTTGCTGCCAAATCTGGATTTGTCATCCCTAAAAACAAACTATCAGGGTCATTGGTCCCCATTTTCCGAGGGGCTAAAAAGCATGGGGTCCCTGGAGTAATCAATGAAGAAAGTTCAAAACAAATTGATAGGAGATCGAAATGGGGACCTGATCTAACACAAGATGCAACTGTTAGGAGGGGAAAGGCTTTAGCTTTGCAGATTAGAGTCGATCAAATTACAATGCAGTTGGAATCAGAAAAGCTGGAAGTTGGGGACACTCAGAACATGCCATTGGCTGAGAATCTAGATAAAAGCAAGTTTGGCCCTCAAATTAATAGCAAGAAGTCAGAAATGCTCGAACTTGAAAAGCGGGAAGTAATAGGTGAAATTCTCAAATTAGATCCCAGCTACAAGCCTCCACCTGGTTTTAAACCATTGTTAAAAGAAGCCTGCATTCCTTTGCCTGTCCAAGAATTTCCCGGGTACAATTTTGTTGGAGTAATATATGGGCCTGAAGGTGATAATCAAAAGCGGCTAGAAAAGGAAACTGGTGCAAAGATAAAAATTCATGGAACCAAAGCAGACACAGGAGAGAAAGGTGAAATTAAGCCTGGAACTGATATCCAGTGCAGTTACAAAGAGATGCATGTTAAAATATCAGCTGATGGTTTTGATAAAGTGGATGCAGCAATGTCAATCATTGAACTACTAATTAACTCTATAACTGGGAATTTAGCTTCTGGTTCTACACCCTCCGTGTCAGTTTCTAGGGACAGCACTGATGTTCCAATTCAAAGCCAAGGAGGCCCCTCTTCTCGTGCAGTTTCTCTATCTCTGGAAAATCAGGCTGGGCTGCAACCAATAGCTGTTAAACAAATGCATGGGGATAACTTTCAACACTCTGGTCCATGGTTTTCAGTAGTTCCATGTCATACCCCTTTGTTTGTTTCTTCCGGTGGTATAGCCTCCTCAAATCCACCAGATCTTGCTAGAGCTCCCCATCTTTTGTCTCAAACTTCAAACATGGCTTCAACTTTTGGCGCTCAACCTGTGCCTGTTGCAGGATTTCAGCCAATTATTCAAAATCAACATGTTTCTATGCATGCACCACCACCACCAAGACAGATTTTACAACATTCCCATATGACTCAGGCAAGTCCTTTGGGTCACACTGGGCTGCCTAGAAATCCTTCTATAGTATCTGTACAGAATTTGTCAACTCCAACAAATGCTTCACTTTCATTTCCAGTTACTTTAAGCCAACCAACACCAATAGGACAACTTCATACATCAATTTCTTCCATGCCTCTACCTATGTCTGGCATATCACCATCACCAATACCTAACCAGCCATTGACCCATCTTGGGGTCTCTTCTGGGCAGAATGAATCATCTGCCCCTGTTAAAATGTCTGTAGGTCCTAGCAATATTGGGCCAATGGCTCCACCAGCAGTTCCACCTACAAGACCTGCTTCTTTACATCAACAAACGGATATTGCATTTATGCCACCACAACCAAATATTTCAATGATGCCACGATCTGCCACCTTTCCTCCACATCAAGCAGGAATTTCCCCTAGACCACCATCTACTTTGAGACCAATGCCTGCACCTACACAGTCATCTGTAAACCATTTGTCTGGACCTGTTTCATTTCCTTCACCTGGAATATCCCCTTCTTTCCCATCACCTCAGCAAGCAGGAATACCTAGTTCTGCTTCTGGAGTTGCTTCTTATCACACCCATGTACAACCACCTGTCTTGGTGACTTCAAATTCTGGAAATTTTACCTTTCAATCACGCCGGCCTAATGCAGACTACAGTCATGTGGTTGCCAGACCAAACAGTCAGGCTACTCCTCAGGGTGCTGCTACACAAGAACCACCTTCTGGTCCACGGCCACTGCCATTTGGGTTTGCTGTGCCTGATCGACCTCTTCAAATTTTTCCAAGGACACAATTCCCCAATCAGGTGGATCAAGCTCAAGCTCATGTGTCTAATGCTCGCTTTGGGGGAAGATCAGGTTCTGTCTCAAACTCGTTCCCACCACCCAGACCCGGTGCATTCCCATTTACTGGTCCAATCCCACAAATGGGCATGAAGAACTTCATTTCTGCCTCTCACTTGCCCAGTGCTGGTGCCCAAAGAGGCATGCCCATTCGACAAAGCTATCCTGCTCAGATGGCACGGCCAGATATCCCAATGCCTCTGGATCAGAAGGTTGTCAACAATCCCCCCATGACTCCTGGTAAGCCAGTATATCCTGCGGACCAAATTTATGATCCCTTTTCGCCCACTTCCATTGCACCTCCACAACTGAAAGGTAATCCTGGAAAATGA 2436 0.4458 MVLNKRMSTEFDSTSAPEPHKMSGASSAATTSGQKLSIFAAKSGFVIPKNKLSGSLVPIFRGAKKHGVPGVINEESSKQIDRRSKWGPDLTQDATVRRGKALALQIRVDQITMQLESEKLEVGDTQNMPLAENLDKSKFGPQINSKKSEMLELEKREVIGEILKLDPSYKPPPGFKPLLKEACIPLPVQEFPGYNFVGVIYGPEGDNQKRLEKETGAKIKIHGTKADTGEKGEIKPGTDIQCSYKEMHVKISADGFDKVDAAMSIIELLINSITGNLASGSTPSVSVSRDSTDVPIQSQGGPSSRAVSLSLENQAGLQPIAVKQMHGDNFQHSGPWFSVVPCHTPLFVSSGGIASSNPPDLARAPHLLSQTSNMASTFGAQPVPVAGFQPIIQNQHVSMHAPPPPRQILQHSHMTQASPLGHTGLPRNPSIVSVQNLSTPTNASLSFPVTLSQPTPIGQLHTSISSMPLPMSGISPSPIPNQPLTHLGVSSGQNESSAPVKMSVGPSNIGPMAPPAVPPTRPASLHQQTDIAFMPPQPNISMMPRSATFPPHQAGISPRPPSTLRPMPAPTQSSVNHLSGPVSFPSPGISPSFPSPQQAGIPSSASGVASYHTHVQPPVLVTSNSGNFTFQSRRPNADYSHVVARPNSQATPQGAATQEPPSGPRPLPFGFAVPDRPLQIFPRTQFPNQVDQAQAHVSNARFGGRSGSVSNSFPPPRPGAFPFTGPIPQMGMKNFISASHLPSAGAQRGMPIRQSYPAQMARPDIPMPLDQKVVNNPPMTPGKPVYPADQIYDPFSPTSIAPPQLKGNPGK* 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2368 811 SMART kh_6 180 271 IPR004087 GO:0003676
Apr10g2368 811 MobiDBLite consensus disorder prediction 280 305 - -
Apr10g2368 811 MobiDBLite consensus disorder prediction 772 811 - -
Apr10g2368 811 MobiDBLite consensus disorder prediction 550 609 - -
Apr10g2368 811 Gene3D - 95 172 - -
Apr10g2368 811 MobiDBLite consensus disorder prediction 568 586 - -
Apr10g2368 811 MobiDBLite consensus disorder prediction 593 609 - -
Apr10g2368 811 Gene3D K Homology domain, type 1 175 286 IPR036612 GO:0003723
Apr10g2368 811 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 182 276 IPR036612 GO:0003723
Apr10g2368 811 Pfam KH domain 195 229 IPR004088 GO:0003723
Apr10g2368 811 PANTHER RNA-BINDING PROTEIN RELATED 28 804 IPR045071 -
Apr10g2368 811 MobiDBLite consensus disorder prediction 7 29 - -
Apr10g2368 811 MobiDBLite consensus disorder prediction 646 667 - -
Apr10g2368 811 ProSiteProfiles Type-1 KH domain profile. 195 266 - -
Apr10g2368 811 MobiDBLite consensus disorder prediction 1 29 - -
Apr10g2368 811 PANTHER RNA-BINDING KH DOMAIN-CONTAINING PROTEIN 28 804 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2368 Apr-Chr10 35468466 35473867 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2368 K13095 - gmx:100777227 1137.48