Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2366 ATGGGAGTGGGAGCAAAGGTGGTTTGTTTGGTGATGGTGATGGTGATGGTGAGCATGGCGGGAGCAGAAGGAGGAGGGAGTTGGTGCGTGGCGAAGATTGGTGCGAGCGAGGAAGAACTGCAGAGAGCGTTGGACTCTGCATGTGGAGGAGGTGGAGCTGCTTGCGTTCCCATTCAGCCAGATGGGCCATGCTACATTCCCAACACCCTCCAAGCTCATGCTTCTTATGCCTTCAACAGCTTCTACCAGCGCAACGCCGGAGCTCCTCATGCGTGCCACTTCGCCGGCACTTCCACCATCGCCCAAACCGATCCCAGCTATGGATCTTGCGTGTACCCCTCCTCCGCAACCCCTAGTTCAACGTCACCGATGAACAACCCGAACGTGCCTACACCCACTGCTACTCCACTCCATGGTGCTGGTGGACTATCTCCAGGAATGAACCCACAAATCCCTGAAAACTCTAGAGCTCCTTCAAAGGCAATGACCACCTCATTTTCAGTTTTCCTTTCATCTCTTCTAATCCTGCATGTATGTGCTTTTGGCTTTGTCAGATGCAACTACATCTCATAA 573 0.5323 MGVGAKVVCLVMVMVMVSMAGAEGGGSWCVAKIGASEEELQRALDSACGGGGAACVPIQPDGPCYIPNTLQAHASYAFNSFYQRNAGAPHACHFAGTSTIAQTDPSYGSCVYPSSATPSSTSPMNNPNVPTPTATPLHGAGGLSPGMNPQIPENSRAPSKAMTTSFSVFLSSLLILHVCAFGFVRCNYIS* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2366 190 MobiDBLite consensus disorder prediction 117 158 - -
Apr10g2366 190 Gene3D - 25 122 - -
Apr10g2366 190 PANTHER BETA-1,3 GLUCANASE 10 137 IPR044788 -
Apr10g2366 190 MobiDBLite consensus disorder prediction 117 133 - -
Apr10g2366 190 PANTHER CARBOHYDRATE-BINDING X8 DOMAIN SUPERFAMILY PROTEIN 10 137 - -
Apr10g2366 190 Pfam X8 domain 28 98 IPR012946 -
Apr10g2366 190 SMART X8_cls 27 112 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2366 Apr-Chr10 35461399 35463431 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g2366 25 114 Glycoside Hydrolase AT2G05790 52.222 2.89e-27 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2366 - - gmx:100306413 184.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g2366 10 35461399 35463431 Apr10g2366 10 35461399 35463431 ECH