Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2350 ATGGCATTGCTTGTCGACAAAACAAAGAGTGGAAGGGAATACAAAGTGAAGGACATGTCTCAGGCCGATTTTGGTCGCCTCGAGATAGAGCTTGCAGAGGTTGAAATGCCGGGCCTAATTGCCTGCCGGGCCGAGTACGGCCCATCACAGCCCTTTAAGGGGGCTAAGATTACGGGCTCACTCCACATGACCATTCAAACCGCCGTTCTCATCGAAACCCTCACCGCTCTCGGCGCCGAAGTTCGATGGTGCTCTTGCAACATTTTCTCCACTCAGGACCATGCCGCCTCCGCCATTGCCCGCGACAGCGCCGCCGTCTTCGCCTGGAAGGGCGAGACTCTCCAGGAGTATTGGTGGTGCACCGAGCGTTCCCTCGACTGGGGCCCCGACGGTGGCCCCGATCTCATCGTCGACGACGGCGGTGACGCCACCCTCCTCATCCACGAGGGCGTTAAGGCCGAAGAGGCTTTCGAGAAGACCGGGCAGGTCCCCGATCCCAATTCCACCGACAATGCGGAGTTCCAGATCGTGCTCACCATCATCAGAGATGGCTTGAAGACCGATCCCAAGAGGTACCACAAGATGAAGGAGAGGCTCGTCGGCGTCTCCGAAGAGACCACCACCGGCGTCAAGAGGCTTTACCAGATGCAGGCCAATGGCACCCTCTTGTTCCCCGCCATCAATGTCAACGACTCCGTCACCAAGAGCAAGTTTGATAACTTGTATGGGTGCCGTCACTCTCTCCCCGATGGATTGATGAGGGCCACTGATGTGATGATTGCCGGAAAGGTAGCGGTGGTGTGTGGATATGGAGATGTTGGGAAGGGTTGTGCCGCCGCATTGAAGCAGGCTGGTGCTCGTGTCATTGTCACAGAGATTGATCCCATTTGTGCCCTTCAAGCTCTCATGGAAGGTCTTCAGGTTCTCACACTCGAGGATGTTCTCTCCGAGGCTGACATCTTCGTTACCACCACAGGTAACAAGGACATTATCATGGTTCAACACATGAGGAAAATGAAGAACAATGCCATCGTGTGCAACATTGGTCACTTCGACAATGAAATCGACATGCTTGGCCTTGAGAACTACCCTGGCGTTAAGCGCACCAATATTAAGCCTCAAACAGATAGATGGGTTTTCCCTGATACCAACACTGGCATCATTGTGTTGGCTGAGGGTCGTTTGATGAACTTGGGATGTGCAACTGGGCACCCCAGCTTTGTGATGTCTTGCTCCTTCACCAATCAGGTCATTGCTCAGATTGAGCTATGGAAAGAGAAGAGTTCTGGCAAGTATGAGAAGAAGGTTTATGTGTTGCCCAAACACCTTGATGAGAAAGTCGCTGCTCTTCACCTTGGCAAGCTTGGAGCCAGGCTCACCAAGCTTAGCAAAGACCAGGCAGATTACATCAGTGTGCCCGTTGAGGGTCCATACAAACCTGCTCATTACAGGTATTGA 1458 0.5336 MALLVDKTKSGREYKVKDMSQADFGRLEIELAEVEMPGLIACRAEYGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAASAIARDSAAVFAWKGETLQEYWWCTERSLDWGPDGGPDLIVDDGGDATLLIHEGVKAEEAFEKTGQVPDPNSTDNAEFQIVLTIIRDGLKTDPKRYHKMKERLVGVSEETTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSEADIFVTTTGNKDIIMVQHMRKMKNNAIVCNIGHFDNEIDMLGLENYPGVKRTNIKPQTDRWVFPDTNTGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQIELWKEKSSGKYEKKVYVLPKHLDEKVAALHLGKLGARLTKLSKDQADYISVPVEGPYKPAHYRY* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2350 485 Hamap S-inosyl-L-homocysteine hydrolase [ahcY]. 9 477 IPR000043 -
Apr10g2350 485 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 240 403 IPR036291 -
Apr10g2350 485 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 381 485 - -
Apr10g2350 485 SMART AdoHcyase_NAD_2 240 403 IPR015878 -
Apr10g2350 485 Gene3D - 243 404 - -
Apr10g2350 485 PANTHER ADENOSYLHOMOCYSTEINASE 1 485 IPR000043 -
Apr10g2350 485 CDD SAHH 23 473 IPR000043 -
Apr10g2350 485 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 13 242 - -
Apr10g2350 485 ProSitePatterns S-adenosyl-L-homocysteine hydrolase signature 2. 262 279 IPR020082 -
Apr10g2350 485 PANTHER ADENOSYLHOMOCYSTEINASE 1 485 - -
Apr10g2350 485 Gene3D - 15 485 IPR042172 -
Apr10g2350 485 Pfam S-adenosyl-L-homocysteine hydrolase 13 484 IPR000043 -
Apr10g2350 485 Pfam S-adenosyl-L-homocysteine hydrolase, NAD binding domain 240 403 IPR015878 -
Apr10g2350 485 SMART AdoHcyase_2 13 484 IPR000043 -
Apr10g2350 485 PIRSF SAHH 2 485 IPR000043 -
Apr10g2350 485 TIGRFAM ahcY: adenosylhomocysteinase 14 477 IPR000043 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2350 Apr-Chr10 35355624 35357710 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2350 K01251 - cpap:110807929 942.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g2350 10 35355624 35357710 Apr10g2350 10 35355624 35357710 ECH