Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2340 ATGCCATTGCCAATGATGTCGTTTTACTCAGTGATCTCCCAGTCCTCCAACTGCATTCCCTTTCCACTTCCCAACACTTCACGTTTTCCACGCCGCAACAACCCTCTTCCTTCTCACTCCCCTTTCTCGCTCCACTCTTTGCATTTACCATGGGGGAGAAAGTCAACAAGGTCAAGGATATGTGCTTCAGTTACAGATGTCTCGGTGGATGTATATGTAAAGGAAAAACAGCTTCCCAAAGGGGAAACTTGGTCTGTCCACAAGTTTGGTGGAACCTGTGTGGGCAGCTCATCTAGAATAAAGAATGTTGCAGACATCATTATTAATGATGATTCGGAGAGGAAATTGGTTGTGGTGTCTGCTATGTCAAAGGTGACTGATATGATGTATGATCTTATCCACAAGGCTCAATCTCGCGATGAGTCTTACGTATCTGCACTGAATGCTGTTTTAGAGAAGCATAGCTCAACCGCGCATGATCTACTTGGTGGAGATGATCTTGCTGCTTTCTTGTCAAAGTTGCATCAGGACATCAGTGACCTCAAGGCAATGCTTCAAGCCATATACATAGCTGGTCATGCAACAGAATCCTTTACTGACTTTGTTGTGGGACACGGAGAGTTATGGTCTGCACAGATATTGTCATTAGTTATTAAGAAGAATGGAATTGACTGCAAATGGATGGATGCGAGGGAAGTCCTTATTGTAAATCCTACTCGTTCTGATCAAGTTGATCCTGACTACTTGGAATCTGAACGAAGACTTGAGAAATGGTACTCTCTGAACCCATGTAAGGTTATCATTGCCACAGGATTTATTGCAAGCACACCTCAAAACATTCCTATTACTCTCAAGCGAGATGGAAGTGACTTCTCCGCAGCAATTATGGGAGCTCTGTTTAGAGCCCGTCAGGTCACAATTTGGACAGATGTTGATGGTGTGTATAGCGCAGATCCTAGAAAAGTTTCTGATGCTGTGATTTTGAAGACATTGTCTTATCAAGAGGCATGGGAAATGTCTTATTTTGGTGCCAATGTCTTACATCCACGCACAATAGTTCCAGTTATTCAATATTGCATACCCATTATAATAAGGAATATTTTCAACCTCTCTGCTTCTGGAACAAAGATCTGCCATCCTTCAATTATTCATGAAGATAGACAGATATTAAAAAATTATGTCAAAGGCTTTACAACAATAGACAACTTGGCACTTGTAAATGTCGAGGGAACAGGATTGGCTGGTGTTCCAGGTACAGCCAGCGCAATTTTTGGTGCAGTAAAAGACGTTGCAGCTAATGTTATTATGATATCTCAGGCTAGTAGTGAGCATTCTGTGTGCTTTGCTGTGCCTGAGAAAGAAGTAAAAGCTGTTGCTGAGGTGTTGCAGTCTGTATTTCACACGGCTTTGGATGCTGGCCGTCTTTCTCAGGTTGCAATCATTCCAAATTGTAGTATTTTGGCAGCTGTCGGCCAGAAAATGGCAAGTACTCCTGGAGTTAGTGCCACCCTTTTCGATGCATTGGCCAAGGCCAACATAAATATCCGTGCTATTGCACAAGGTTGTTCGGAGTACAACATTACTGTTGTGGTTCAGCGAGAGGATTCTATAAAGGCTCTACGGGCTGTTCATTCCAGATTTTATCTCTCAAAAACCACCATAGCAATGGGCCTTATTGGACCTGGATTAATTGGAAGCACGCTACTTGACCAGCTAAGGGATCAGGCTGCAATTCTGAAAGAAGAATTGAACATTGATTTGCGTGTAATGGGCATCATGGGTTCGAAGTTGATGCTCCTCGATGATGCGGGCATCAACTTGGTTAAGTGGAGAGAACTTCGAGAAGAAAAAGGAGAAGTGGCTAATTTGGAAAAATTTGTTCAACATGTGCATGCAAATCATTTTATACCAAACACTGTGTTAGTGGACTGCACACCTGACTCCATCATTGCAACCCATTACAATGACTGGCTACGCAAAGGAATACATGTAATCACCCCCAATAAGAAGGCAAATTCAGGACCACTTGATGAGTATTTGAGGTTAAGAGCTGTTCAGAGGCAATCATACACACATTACTTCTATGAAGCTACTGTTGGTGCTGGTCTTCCAATTATCAGCACTTTACGGGGGCTTCTTGAAACTGGTGACAGAATATTGCAAATTGAAGGCATATTCAGTGGCACTTTGAGTTACATCTTTAATAACTTCAAAGATGGCCGGCTTTTTAGTGAGGTAGTAGCTGAAGCAAGGGAAGCAGGTTATACGGAACCCGATCCAAGGGAAGATCTGTCTGGAACTGATGTTGCCAGAAAGGTGATAATTCTTGCAAGGGAATCAGGTTTGAAGCTAGAGCTTTCTGATATTACCGTTGAAAATCTTGTGCCGGAACCCTTACGAATTAGTGCATCAGCTCAAGAGTTTATGCAACAATTACCAAAATTTGACCAAGAATTAACAAAGAAACAAAAAAATGCGGAAAGTGCTGAGGAAGTGTTGAGATACGTGGGAGTGGTGGACGTGACTAATCAAAAGGGAGTGGTAGAGCTGAGAAAATACAAGAAGGATCATCCATTTGCACAACTATCTGAGTCAGATAATATTATTGCATTCACAACAAGAAGGTATAAAAATCAGCCTCTGATAGTTCGTGGACCAGGAGCTGGTGCCCAAGTCACAGCTGGTGGAATATTTAATGACATTTTACGACTTGCCTCATATCTTGGTGCTCCATCATAA 2739 0.4231 MPLPMMSFYSVISQSSNCIPFPLPNTSRFPRRNNPLPSHSPFSLHSLHLPWGRKSTRSRICASVTDVSVDVYVKEKQLPKGETWSVHKFGGTCVGSSSRIKNVADIIINDDSERKLVVVSAMSKVTDMMYDLIHKAQSRDESYVSALNAVLEKHSSTAHDLLGGDDLAAFLSKLHQDISDLKAMLQAIYIAGHATESFTDFVVGHGELWSAQILSLVIKKNGIDCKWMDAREVLIVNPTRSDQVDPDYLESERRLEKWYSLNPCKVIIATGFIASTPQNIPITLKRDGSDFSAAIMGALFRARQVTIWTDVDGVYSADPRKVSDAVILKTLSYQEAWEMSYFGANVLHPRTIVPVIQYCIPIIIRNIFNLSASGTKICHPSIIHEDRQILKNYVKGFTTIDNLALVNVEGTGLAGVPGTASAIFGAVKDVAANVIMISQASSEHSVCFAVPEKEVKAVAEVLQSVFHTALDAGRLSQVAIIPNCSILAAVGQKMASTPGVSATLFDALAKANINIRAIAQGCSEYNITVVVQREDSIKALRAVHSRFYLSKTTIAMGLIGPGLIGSTLLDQLRDQAAILKEELNIDLRVMGIMGSKLMLLDDAGINLVKWRELREEKGEVANLEKFVQHVHANHFIPNTVLVDCTPDSIIATHYNDWLRKGIHVITPNKKANSGPLDEYLRLRAVQRQSYTHYFYEATVGAGLPIISTLRGLLETGDRILQIEGIFSGTLSYIFNNFKDGRLFSEVVAEAREAGYTEPDPREDLSGTDVARKVIILARESGLKLELSDITVENLVPEPLRISASAQEFMQQLPKFDQELTKKQKNAESAEEVLRYVGVVDVTNQKGVVELRKYKKDHPFAQLSESDNIIAFTTRRYKNQPLIVRGPGAGAQVTAGGIFNDILRLASYLGAPS* 913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2340 912 Pfam Homoserine dehydrogenase, NAD binding domain 560 696 IPR005106 GO:0016491|GO:0050661
Apr10g2340 912 Gene3D - 555 904 - -
Apr10g2340 912 Gene3D - 390 549 - -
Apr10g2340 912 CDD ACT_AKi-HSDH-ThrA-like_1 403 482 - -
Apr10g2340 912 Pfam ACT domain 482 545 IPR027795 -
Apr10g2340 912 ProSitePatterns Homoserine dehydrogenase signature. 750 772 IPR019811 GO:0006520
Apr10g2340 912 CDD AAK_AK-HSDH 84 378 IPR041743 -
Apr10g2340 912 Pfam ACT domain 412 466 IPR002912 -
Apr10g2340 912 ProSiteProfiles ACT domain profile. 408 483 IPR002912 -
Apr10g2340 912 PANTHER ASPARTOKINASE-HOMOSERINE DEHYDROGENASE 41 912 - -
Apr10g2340 912 Gene3D Dihydrodipicolinate Reductase; domain 2 715 886 - -
Apr10g2340 912 CDD ACT_AKi-HSDH-ThrA_2 484 549 - -
Apr10g2340 912 TIGRFAM asp_kinases: aspartate kinase 84 547 IPR001341 GO:0004072|GO:0008652
Apr10g2340 912 Pfam Amino acid kinase family 85 366 IPR001048 -
Apr10g2340 912 PANTHER - 41 912 IPR011147 GO:0004072|GO:0004412|GO:0009067
Apr10g2340 912 Pfam Homoserine dehydrogenase 704 902 IPR001342 GO:0006520
Apr10g2340 912 SUPERFAMILY ACT-like 392 467 IPR045865 -
Apr10g2340 912 ProSitePatterns Aspartokinase signature. 86 94 IPR018042 GO:0004072|GO:0008652
Apr10g2340 912 ProSiteProfiles ACT domain profile. 489 566 IPR002912 -
Apr10g2340 912 SUPERFAMILY ACT-like 474 563 IPR045865 -
Apr10g2340 912 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 551 726 IPR036291 -
Apr10g2340 912 SUPERFAMILY Carbamate kinase-like 85 379 IPR036393 -
Apr10g2340 912 Gene3D - 84 380 IPR036393 -
Apr10g2340 912 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 704 889 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2340 Apr-Chr10 35280508 35288622 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2340 K12524 - gmx:548017 1470.68