Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2338 ATGCTCGTGTGGATCTCAGTTGTATATGTATATATAACACTATCCACTCAACCTGCTCCATATATGTCTTCTACAAGAGATAAACCCCTCGTGTACGTTATCTACCGAGTGTCAAATACACGCGCCACCGCTACGATGGTCCACCACCGCTTCCTCCTCGTAACATACCCCATACAAGGCCACATCAACCCCACAATTCAGTTCGCGAAACGACTCGTTGCCATCGGTGTCCACGTCACCTTCGTTATAAGCTTCAACCTTTACCGTCGCATGCTTAACAAACCGACCATCCATGGCCTCTCTTTCGCCCCCTTCTCTGACGGCTACGACGACGGTTACAACTCCAGCGACGACTTCGACGTGATGAATTACATGTTGGAGCTGAAGCGCCGTGGTGCAGAGTTTCTTAGAAACACCATAGCCGCCGCCGCAGAGGAAGGTCACCCTTTCACTTGCGTCACGTACACCCTCCTCCTTGCTTGGGCTGCCAAGGTGGCGCGTGAGTTTCACATTCCGGGGACGTTGCTGTGGATTCAACCAGCAACGGTGTTTGATATCTACTATCACTACTTCCATGAATACGGTGACTACATCAGCGACAAATCCAAGGACCCCACATGTTCTTCCATTGAATTACCGGGATTGCCATTTTCTCTCACCGCACGTGATCTTCCCTCGTTCCTCTTACCCTCCAATACTTATCGTTTTGCTCTTCCTTCCTTTGAAGAACAACTTCAAGAGCTTGACCAAGAAACCAACCCTAGGGTTCTTGTGAATACCTTTGAGGAGTTGGAACCTGAGGCTTTGAAAGCAATTGATAAGTTTACAATGGTACCCATTGGGCCTTTGATTCCCTCTGCCTTCTTGGATGGTAAAGACCCTTCTGATACTTCCTTTGGCGGGGACATCTTCCATGCATCAAATGATGACCTTGAGTGGTTAGACTCAAAGCCTGAGTTTTCTGTGGTTTATGTGTCTTTTGGTACAATTGCTGTGTTGCCTAAGAGACAGATGGAGGAGATTGCACGTGCGTTGCTAGATTCTGGATGTTCCTTTTTGTGGGTCATTAGAGAAAAAACAAAGGAAGGAGAGGAACAAAGAGAAAAGGGTGAGGAGTTGAGTTGTAGAGAGGAATTGGAAAAGAGGGGTAAGATAGTAAAATGGTGTTCTCAGGTGGAGGTTCTGTCACATGCTTCGTTGGGTTGTTTTGTGACACATTGTGGTTGGAATTCAACCATGGAAAGTTTGGCTTCGGGGGTTCCTATGGTGGCGTTTCCTCAGTGGACAGACCAAACTACTAATGCAAAGGTGATACAAGATGTGTGGAAGACAGGGGTGAGGATAGATGATAAGGTGAATGAGGAGGGGATTGTGGAAGCTAGGGAAATTAGGAGGTGTCTGGAAGTGGTTATGGGGAGTGGAGAAAAAGGAGAGGATTTGAGAAGGAATGCAAAGAAATGGAAATATTTGGCAAGGGAAGCTGTGAAGGAAGGAGGCTCTTCAGACAGGAACATGAGATGTTTTGTGGATGATGTTGGAAAATATGTACAGGGTAGTTTCATGTAA 1566 0.4674 MLVWISVVYVYITLSTQPAPYMSSTRDKPLVYVIYRVSNTRATATMVHHRFLLVTYPIQGHINPTIQFAKRLVAIGVHVTFVISFNLYRRMLNKPTIHGLSFAPFSDGYDDGYNSSDDFDVMNYMLELKRRGAEFLRNTIAAAAEEGHPFTCVTYTLLLAWAAKVAREFHIPGTLLWIQPATVFDIYYHYFHEYGDYISDKSKDPTCSSIELPGLPFSLTARDLPSFLLPSNTYRFALPSFEEQLQELDQETNPRVLVNTFEELEPEALKAIDKFTMVPIGPLIPSAFLDGKDPSDTSFGGDIFHASNDDLEWLDSKPEFSVVYVSFGTIAVLPKRQMEEIARALLDSGCSFLWVIREKTKEGEEQREKGEELSCREELEKRGKIVKWCSQVEVLSHASLGCFVTHCGWNSTMESLASGVPMVAFPQWTDQTTNAKVIQDVWKTGVRIDDKVNEEGIVEAREIRRCLEVVMGSGEKGEDLRRNAKKWKYLAREAVKEGGSSDRNMRCFVDDVGKYVQGSFM* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2338 521 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 49 512 - -
Apr10g2338 521 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 48 513 - -
Apr10g2338 521 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 313 446 IPR002213 GO:0008194
Apr10g2338 521 ProSitePatterns UDP-glycosyltransferases signature. 388 431 IPR035595 -
Apr10g2338 521 PANTHER GLYCOSYLTRANSFERASE 48 513 - -
Apr10g2338 521 Gene3D Glycogen Phosphorylase B; 54 505 - -
Apr10g2338 521 Gene3D Glycogen Phosphorylase B; 298 493 - -
Apr10g2338 521 CDD GT1_Gtf-like 50 494 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2338 Apr-Chr10 35272667 35275151 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g2338 51 511 Glycosyltransferase AT4G15550 50.524 1.31e-160 463
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2338 - - gmx:100800222 713.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g2338 10 35272667 35275151 Apr10g2338 10 35272667 35275151 ECH