Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2326 ATGCCAATCTTCTCTGTAACGCTTGGTTCCTTCTCTTCCCTTTCAGTGTCAGCTTCTCTGTCAAAATCTGATCTTTCCCCTTTCCTCAATTTTCCCAACAAATTAACTCTCAATCTCAAATCACCTTCGCAATCCCATCAGACTGCCACTACCAAACTTTTCTTCTCTTCAAATACTCAAATTCACCAAAACCCTGACTCTGTAATTCTCCAACGCCCTTCTCCTGCTGACCCAAACGATGCCGCTCGTCAAGCTCGGAGATCTTCAGATTGGAAAGCTGCAAAGGCATATAAAGATAGTGGAGTCGTTTATAATGGTAGAGTTGAAGGTTTTAACAATGGAGGCTTGCTCGTTCGCTTTTTTTCTATTCTTGGTTTTCTCCCTTTCCCACAGTTGAGTCCATTGCATTCTTCTAAAGAACCAGATAAATCTATCCAAGAAATTGCAAAAGGCTTAATCGGTTCAATTATGCCTATTAAGGTTAATGTAGGGGACATTTTTGAAGTAAGAGTTGGTAATGTAGAGGACTATGGTGCTTTTGTTCATTTGCGCTTCCCTGACGGTCTTTATCACCTTACTGGACTAATACACATATCAGAAGTATCATGGGATCTAATTCATGATGTCGGAGATATCTTGAAAGAAGGTGATGAAGTGAGGGTCAAAGTTATTGGTATTGATTGGGAAAAATCAAGGATTAAACTGTCAATTAAACAGCTAGAAGAAGATCCTCTTCTAGAAACTCTGGACAAAGTAATACCTCAGGATGGTTCAGTTGATCCTGATTCTCTGAGCGGTAGTGATAGCAGTGGTATTGAGCCTCTCCCAGGGCTTGAAACAATCCTTGAAGAGCTACTGCAGGAAGATGGTATATATGATGCAAGAATCAGCCGTCAAGGGTTTGAAAAACGAGTGGTCTCACAAGACTTGCAGCTTTGGCTTTCTAATGCACCTCCCACGAATCAAAGGTTCACTCTCCTTGCTCGGGCTGGAAGACAGGTGCAGGAGATATATCTGACTACATCCCTTGATCAGGAAGGTATCAAGAAGGCATTACAACGAGTATTAGAGCGTGTCCCTTGA 1083 0.4183 MPIFSVTLGSFSSLSVSASLSKSDLSPFLNFPNKLTLNLKSPSQSHQTATTKLFFSSNTQIHQNPDSVILQRPSPADPNDAARQARRSSDWKAAKAYKDSGVVYNGRVEGFNNGGLLVRFFSILGFLPFPQLSPLHSSKEPDKSIQEIAKGLIGSIMPIKVNVGDIFEVRVGNVEDYGAFVHLRFPDGLYHLTGLIHISEVSWDLIHDVGDILKEGDEVRVKVIGIDWEKSRIKLSIKQLEEDPLLETLDKVIPQDGSVDPDSLSGSDSSGIEPLPGLETILEELLQEDGIYDARISRQGFEKRVVSQDLQLWLSNAPPTNQRFTLLARAGRQVQEIYLTTSLDQEGIKKALQRVLERVP* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2326 360 Gene3D - 159 240 IPR012340 -
Apr10g2326 360 SMART S1_6 162 238 IPR022967 -
Apr10g2326 360 SUPERFAMILY Nucleic acid-binding proteins 162 251 IPR012340 -
Apr10g2326 360 PANTHER OS03G0844900 PROTEIN 160 360 - -
Apr10g2326 360 PANTHER OS03G0844900 PROTEIN 22 161 - -
Apr10g2326 360 MobiDBLite consensus disorder prediction 68 88 - -
Apr10g2326 360 Pfam S1 RNA binding domain 160 238 IPR003029 GO:0003676
Apr10g2326 360 ProSiteProfiles S1 domain profile. 164 238 IPR003029 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2326 Apr-Chr10 35205711 35208757 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2326 - - gmx:100798303 511.916