Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2324 ATGATGGAGGGGGTGATTCTGAATCCTATAGAGTGTCTGGGTAAAGGGTTTGATTTGACGAGTGATTTTCGATTGAAATTTGCAAAGGGTTGTAGGAGGTTGGTGGTGGTTGATCAAGAGAACAAGAGGGACATTACAGTTCCTGGTGGAGCAATCATTCCAAATGTTTCTGAGGATATTCGCTGTGACAAAGGAGATCGCCTACGTTTTAAGTCTGATGTTCTTCAATTCAACCAGATGTCTGAATTGCTTAATCAGAAATCAGCAATACAAGGAAAAATACCATCTGGCTATTTTAACGCTCTTTTTGATTTGAGTGGTGATTGGTTACGTGATGCTCATGACATCAAACATCTTGCTTTTGATGGTTATTTCATTTCGCTGTACTATTTGCACCTAACTCCTTCACACCTTATACTGCAAGAGGAAGTAAAGAAATCTGTTCCAGCTCAGTGGGATCCAGCTTCTTTATCCAGGTTCATTCAGACATATGGTACACACATAATAATAGGTATGGCTGTAGGAGGTCAAGATGTAATCTGTGTCAAACAAAGACATTCTTCAAAAATTCCTCCTGGTGATCTAAGAAGACATTTAGAGAATCTAGGAGATTTTCTATTTTCAGATTTGAGAAGTCATTCTCAACTACAAAGGAAGACCACAGAAGGCAAACAGAAAGTTCCTGATGTCTTTAATCGCGTGATGCAATCAAGCACAATGCAGTTCACCAGTATTTCAGAAACATCAAGCAAGGATGGCCTCACCATCCTTTGCTCAAAAAGAGGAGGAGATGTGTTCAAGCAAGGTCACTCAAATTGGCTCCAGACAGTTGCTTCTAATCCTGAAGCAATCCTCTTCAAGTTTGTGCCTATTTCCTCACTCCTTACAGGAATTCCTGGAAGTGGATATCTTAGTCATGCAATCAATTTGTATTTACGTTATAAGCCACCTCCTGAAGATTTACAATGCTTCTTGGAGTTTCAAATTCCAAGGCAATGGGCACCCATGTTTTATGAGCTACCTCTAAGGCATCAAAGGAAAAAAACTTCTTCCCCTTCCCTGCAGTTTAGTTTCATGTGTTCAATGCTTCATGTCAGCGCTGCAAAGGTAGAAAGTGATCAAAAACCTGTGGTGGGTCTCCGCTTGTACTTAGAAGGCAGAAAATGTGACAGACTTGCAATACATATAAATCATCTTTCAGGCCTCCCAAATACAATGATCCTCTCTTCAGGCACCTCAACCCCATCTATGTGGCGAGGATCTGATGATAATGAATCCAGTGACCACTTTCTGGAACCAATAAGGTGGAAAAGATTTGCAAACGTGTGCACTGCAGTGGTTAAGCATGACCCTAGCTGGTTGAATGAATCAAATGGTGTTTACATTGTAACTGGTGCACAACTCATTAGCAAAGGAAGCTGGCCAAAGAATGTGCTTCACTTGCGCTTATTATTTACTCACATACCCAATTGCAGTATTAGGAAATCAGAATGGGCTGCAGCACCGGAGGCATCAAGAAAATCATCTTTCCTCACAAATCTAAGCACAACATTTTCATTCACACAACAAAGTGTCACTGCTTCTCAGAAGCAGGCTCCAACTGTTCTTAACTCAGGTGTTTATCCAGATGGTCCACCTGTTCCTGTTGGTTCTGGTAAACTCCTTAAATATGTGGAGACAAGTGAGGTTGTTCGAGGCCCGCATGATGCTCCTGGTCATTGGTTGGTAACAGCTGCTAAGCTTGTGACAGAGGGTGGTAAAATTGGATTACAAGTGAAGTTTGCATTGTTAGACTATTAG 1800 0.4128 MMEGVILNPIECLGKGFDLTSDFRLKFAKGCRRLVVVDQENKRDITVPGGAIIPNVSEDIRCDKGDRLRFKSDVLQFNQMSELLNQKSAIQGKIPSGYFNALFDLSGDWLRDAHDIKHLAFDGYFISLYYLHLTPSHLILQEEVKKSVPAQWDPASLSRFIQTYGTHIIIGMAVGGQDVICVKQRHSSKIPPGDLRRHLENLGDFLFSDLRSHSQLQRKTTEGKQKVPDVFNRVMQSSTMQFTSISETSSKDGLTILCSKRGGDVFKQGHSNWLQTVASNPEAILFKFVPISSLLTGIPGSGYLSHAINLYLRYKPPPEDLQCFLEFQIPRQWAPMFYELPLRHQRKKTSSPSLQFSFMCSMLHVSAAKVESDQKPVVGLRLYLEGRKCDRLAIHINHLSGLPNTMILSSGTSTPSMWRGSDDNESSDHFLEPIRWKRFANVCTAVVKHDPSWLNESNGVYIVTGAQLISKGSWPKNVLHLRLLFTHIPNCSIRKSEWAAAPEASRKSSFLTNLSTTFSFTQQSVTASQKQAPTVLNSGVYPDGPPVPVGSGKLLKYVETSEVVRGPHDAPGHWLVTAAKLVTEGGKIGLQVKFALLDY* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2324 599 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1 8 599 IPR044663 GO:0006952|GO:0012501|GO:2000031
Apr10g2324 599 SMART MACPF_8 116 313 IPR020864 -
Apr10g2324 599 Pfam MAC/Perforin domain 99 311 IPR020864 -
Apr10g2324 599 ProSiteProfiles Membrane attack complex/perforin (MACPF) domain profile. 1 325 IPR020864 -
Apr10g2324 599 PANTHER OS02G0475300 PROTEIN 8 599 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2324 Apr-Chr10 35198300 35201646 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2324 - - gmx:100818022 1017.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g2324 10 35198300 35201646 Apr2g1658 2 22220397 22226582 PCT